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Name : PputUW4_02273 (PputUW4_02273) Accession : YP_007029277.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Unknown Product : short-chain dehydrogenase/reductase SDR Function : - COG functional category : - COG ID : - EC number : - Position : 2658697 - 2659434 bp Length : 738 bp Strand : + Note : [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) DNA sequence : ATGTCGAACATCTCGAAAAAAGTCGTTCTGATCACGGGCGCGAGCAGTGGCATAGGCGAGGCGACAGCGCGCCTGTTAGC CAGCAAGGGGGCGCATGTCGTACTCGGGGCGCGTCGTACCGAGCGCCTCGAAGTACTCTGTGGCGAGATCAACGCGAGCG GTGGAGTCGCGCACTTTCAGGCATTGGATGTCACCCGCCGAGACGACGTACAAGGGTTTGTGGACTTTGCGTTCAAGCTG CATGGCCGGGTCGATGTGATCGTCAACAATGCCGGGGTGATGCCGCTGTCGAAACTCGAGGCGCTGAAAGTCTCCGAGTG GGACCGGATGATCGACGTCAATATTCGCGGCGTGTTGCACGGTATCGCGGCCGGTTTGCCGCTGATGCAAAAACAGCAAT CAGGCCAGTTCATCAATATCGCCTCGATCGGTGCCTACACCGTCAGCCCTACGGCGGCGGTCTACTGCGCGACCAAATTT GCCGTGCGCGCCATCTCGGAAGGGTTGCGCCAGGAGGTCGGCGGGGACATCCGTGTCACCGTGATTTCCCCGGGCGTTAC CGAGTCCGAATTGGCCGAGAGCATTTCCGATGAAGGCGGGCGGGCCGAGATGCGCGAGTTCCGCAAGATCGCCATCCCTG CAATGGCGGTCGCTCGTGCGATCGCTTACGCCATTGAACAGCCTGCCGATGTGGACGTCAGTGAGCTGATTGTCCGCCCG ACCGCCAGTGCGTTCTGA Protein sequence : MSNISKKVVLITGASSGIGEATARLLASKGAHVVLGARRTERLEVLCGEINASGGVAHFQALDVTRRDDVQGFVDFAFKL HGRVDVIVNNAGVMPLSKLEALKVSEWDRMIDVNIRGVLHGIAAGLPLMQKQQSGQFINIASIGAYTVSPTAAVYCATKF AVRAISEGLRQEVGGDIRVTVISPGVTESELAESISDEGGRAEMREFRKIAIPAMAVARAIAYAIEQPADVDVSELIVRP TASAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| adh | CAI59964.1 | short-chain dehydrogenase | Not tested | LIPI-2 | Protein | 5e-53 | 49 |
| unnamed | CAC20627.1 | hypothetical protein | Not tested | Internalin | Protein | 1e-40 | 47 |
