Gene Information

Name : serS (PputUW4_01834)
Accession : YP_007028844.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.11
Position : 2163734 - 2165014 bp
Length : 1281 bp
Strand : +
Note : [J] COG0172 Seryl-tRNA synthetase

DNA sequence :
ATGCTCGATTCCAAACTGTTACGTAGCAACCTTCAGGACGTAGCGGACCGCCTGGCATCCCGTGGCTTTGTGCTGGATGT
TGCGCGCATCGAAGCGCTGGAAGAACAGCGCAAGACCGTCCAGACCCGCACCGAAGCACTGCAGGCTGAACGTAACGCGC
GCTCCAAATCCATCGGTCAGGCCAAGCAGCGTGGCGAAGACATCGCGCCGCTGATGGCGGATGTCGAGCGCATGGCGGGC
GAATTGAGCGCCGGTAAAGTCGAACTGGACGCGATCCAGACCGAACTGGACTCGATCCTGCTGGGTATTCCCAACCTGCC
GCACGAATCCGTGCCGGTTGGCGAAGACGAAGACGGCAACGTCGAAGTGCGCCGTTGGGGGACCCCGACTGCCTTCGATT
TCCCGGTTCAGGACCACGTTGCCCTGGGTGAGAAGTTCGGCTGGCTGGACTTCGAAACCGCCGCCAAGCTGTCCGGCGCC
CGTTTCGCCCTGCTGCGTGGCCCGATCGCCCGTCTGCACCGCGCCCTGGCGCAGTTCATGATTAACCTGCACGTCACCGA
GCACGGCTACGAAGAGGCCTACACGCCTTACCTGGTCCAGGCCCCGGCGCTGCAAGGCACCGGTCAGCTGCCGAAGTTCG
AAGAAGACCTGTTCAAGATCGCCCGCGAAGGCGAGGCCGACCTGTACCTGATCCCGACCGCCGAAGTGTCGCTGACCAAC
ATCGTCGCCGGAGAAATCGTCGATTCGAAACTGCTGCCGATCAAGTTCGTCGCCCACACGCCGTGCTTCCGCAGTGAAGC
CGGCGCATCGGGTCGTGATACCCGCGGCATGATCCGTCAGCACCAGTTCGACAAGGTTGAAATGGTGCAGATCGTCGAGC
CGTCGAAGTCGATGGAAGCGCTGGAAGGCCTGACCGCCAACGCCGAGAAAGTCCTGCAACTGCTGGAACTGCCTTACCGC
ACCCTGGCGCTGTGCACCGGCGACATGGGCTTCAGCGCGGTCAAGACCTACGACCTGGAAGTGTGGATCCCGAGCCAGGA
CAAGTACCGCGAAATCTCATCGTGCTCCAACTGTGGCGACTTCCAGGCCCGCCGCATGCAGGCGCGCTTCCGCAACCCGG
AAACCGGCAAGCCGGAACTGGTACACACCCTGAACGGCTCCGGCCTGGCAGTGGGTCGCACCCTGGTGGCGGTGCTGGAG
AACTATCAGCAGGCCGACGGTTCGATCCGTGTGCCCGAGGTTCTCAAGCCGTACATGGGTGGCCTTGAGGTCATCGGCTA
A

Protein sequence :
MLDSKLLRSNLQDVADRLASRGFVLDVARIEALEEQRKTVQTRTEALQAERNARSKSIGQAKQRGEDIAPLMADVERMAG
ELSAGKVELDAIQTELDSILLGIPNLPHESVPVGEDEDGNVEVRRWGTPTAFDFPVQDHVALGEKFGWLDFETAAKLSGA
RFALLRGPIARLHRALAQFMINLHVTEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIAREGEADLYLIPTAEVSLTN
IVAGEIVDSKLLPIKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPSKSMEALEGLTANAEKVLQLLELPYR
TLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNCGDFQARRMQARFRNPETGKPELVHTLNGSGLAVGRTLVAVLE
NYQQADGSIRVPEVLKPYMGGLEVIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 1e-105 54