Gene Information

Name : qseB (PputUW4_01497)
Accession : YP_007028507.1
Strain : Pseudomonas sp. UW4
Genome accession: NC_019670
Putative virulence/resistance : Virulence
Product : two component transcriptional regulatorn QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1745935 - 1746615 bp
Length : 681 bp
Strand : +
Note : [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCACGTACTGGTTTGCGAAGACGATGAGCTGATCGCCAGCGGCATCGTTGCCGGCCTGACCGCCCAGGGCCTGACCGT
GGAGCACGTGGCCACGGCGTCCGCTGCCCGGGCCATGCTCAGGGTCGCGGAATTCGATGTCATGGTGCTCGACCTTGGGC
TGCCGGACGAAGATGGCCTCAAGCTGCTGCAACAGTTGCGTCATCAGGGCCTGGAGTTGCCGGTTTTGATCCTCACCGCG
CGTGATTCGGTCACCGACCGCGTCGATGGCCTGCAAGCCGGTGCCGATGATTACCTGCTCAAACCCTTCGACCTGCGCGA
ACTCGCTGCGCGCTTGCACACGCTGTTGCGACGGGTGGCGGGGCGCAGCGTCAACCTGATCGAACACGGCGCCCTGACCT
ACGATCCGAGCAGCCGCGAGACCAAACTCGCCGGCCAGCCGGTGGATCTCTCGCGTCGCGAGCAGTCGCTGCTGCAAGCC
TTGTTGCATAACCGTGGCCGGGTGCTGTCCACCGAGCAACTGAAGGACAGCGTCTACGGTTTCAACGACGAGCTGGAAAG
CAATGCCCTCAACGTTCATATCCATCACCTGCGGCGCAAGCTCGGCAATGGCATTGTCGAGACCGTGCGCGGCCTGGGCT
ATCGCCTGGGGCCGGCTGATGGCGGAGAAGAATCGAAGTGA

Protein sequence : 
MHVLVCEDDELIASGIVAGLTAQGLTVEHVATASAARAMLRVAEFDVMVLDLGLPDEDGLKLLQQLRHQGLELPVLILTA
RDSVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAGRSVNLIEHGALTYDPSSRETKLAGQPVDLSRREQSLLQA
LLHNRGRVLSTEQLKDSVYGFNDELESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPADGGEESK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-54 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_007028507.1 two component transcriptional regulatorn QseB BAC0487 Protein 2e-37 43
qseB YP_007028507.1 two component transcriptional regulatorn QseB NC_002516.2.879194.p Protein 5e-34 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_007028507.1 two component transcriptional regulatorn QseB VFG1389 Protein 3e-28 44
qseB YP_007028507.1 two component transcriptional regulatorn QseB VFG0473 Protein 2e-41 42
qseB YP_007028507.1 two component transcriptional regulatorn QseB VFG1390 Protein 1e-30 41