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Name : gabD1 (PputUW4_00146) Accession : YP_007027159.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.2.1.16 Position : 164045 - 165487 bp Length : 1443 bp Strand : + Note : [C] COG1012 NAD-dependent aldehyde dehydrogenases DNA sequence : ATGCAGCTTAAAGACACCCAGTTGTTCCGCCAGCAAGCCTTCATCGATGGCGCGTGGGTTGATGCGGACAATGGTCAGAC GATCAAGGTCAACAACCCGGCAACGGGCGAAATTCTGGGCACTGTGCCGAAAATGGGCGCTGCCGAAACCCGCCGTGCGA TCGAAGCTGCTGACAAAGCGCTGCCGGCCTGGCGTGCCCTGACCGCCAAAGAGCGTGCAGGCAAACTGCGTCGCTGGTAT GAACTGATCATCGAGAACCAGGACGACCTGGCTCGCCTGATGACCCTGGAACAGGGCAAGCCATTGGCCGAAGCCAAGGG CGAAATCGTTTACGCCGCGTCCTTCATCGAATGGTTCGCCGAAGAAGCCAAGCGCATCTACGGTGACGTGATTCCGGGCC ACCAGCCAGACAAGCGCCTGATCGTGATCAAGCAGCCAATCGGCGTGACCGCTGCAATCACCCCGTGGAACTTCCCGGCT GCCATGATCACCCGTAAAGCCGGCCCGGCCCTGGCCGCCGGTTGTACCATGGTGCTCAAGCCTGCTTCGCAAACTCCGTT CTCCGCCTTTGCCCTGGCTGAACTGGCCCAGCGTGCCGGTATCCCTGCAGGCGTGTTCAGCGTGGTTTCCGGCAGCGCCG GCGACATCGGCAGCGAACTGACCAGCAACCCGATCGTGCGCAAGCTGTCCTTCACCGGTTCGACCGAAATCGGTCGTCAA CTGATGTCGGAATGCGCCAAGGACATCAAGAAAGTGTCCTTGGAACTGGGCGGCAACGCGCCGTTCATCGTGTTCGACGA CGCGGACCTGGATAAGGCCGTCGAAGGCGCGATCATCTCCAAGTACCGCAACAACGGTCAGACCTGCGTCTGCGCCAACC GCCTGTACATTCAGGATTCGGTCTACGACGCATTCGCCGAAAAGCTGAAAGCCGCTGTGGCCAAGCTCAAGATCGGTAAC GGTCTGGAAGCAGGCACCACCACTGGCCCGCTGATCGACGAAAAAGCCGTGGCCAAGGTGCAAGAGCACATTGCTGACGC CGTTTCCAAAGGCGCCACCGTGCTGTCCGGCGGCAAGTCGATGGAAGGTAACTTCTTCGAACCGACCATCCTGACCAACG TGCCGAACAACGCTGCCGTGGCCAAGGAAGAAACCTTCGGTCCATTGGCTCCACTATTCCGCTTCAAAGACGAAGCCGAT GTGATCGCGATGTCCAACGACACCGAGTTCGGTCTGGCCTCGTACTTCTATGCTCGCGACCTGGGCCGTGTGTTCCGTGT GGCTGAAGCCCTGGAATACGGCATGGTCGGCGTTAACACCGGGTTGATCTCCAACGAAGTCGCGCCGTTCGGCGGCATCA AGGCCTCGGGCCTGGGCCGTGAAGGCTCCAAGTACGGCATCGAAGATTACCTGGAAATCAAATACCTCTGCCTGGGCATC TAA Protein sequence : MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKALPAWRALTAKERAGKLRRWY ELIIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFAEEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSAFALAELAQRAGIPAGVFSVVSGSAGDIGSELTSNPIVRKLSFTGSTEIGRQ LMSECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDSVYDAFAEKLKAAVAKLKIGN GLEAGTTTGPLIDEKAVAKVQEHIADAVSKGATVLSGGKSMEGNFFEPTILTNVPNNAAVAKEETFGPLAPLFRFKDEAD VIAMSNDTEFGLASYFYARDLGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-155 | 66 |
