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Name : kdpB (PputUW4_01392) Accession : YP_007028403.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : - COG ID : - EC number : 3.6.3.12 Position : 1627349 - 1629415 bp Length : 2067 bp Strand : + Note : [P] COG2216 High-affinity K+ transport system, ATPase chain B DNA sequence : ATGAATATGCATGTTCCAGCTTCAAAACCTGCATCACCGACCAAGTCGGCCGAAGCCCCGAAAACCGCGATCTCGGCCCT GTGGCGCCCGGCGCTGGTGCAAGCCTTCGTCAAGCTCGACCCACGGCAACTGCAGCGCGCACCGGTGATGCTGGTGGTCG AACTGACCGCGATCCTGACCACCGTGCTGTGCTTCATTCCCGATACGGCCGTACCGACCTTCGTCGCCGCGCAAATTGCC GTGTGGCTGTGGTTCACCGTGTTGTTCGCCAACTTCGCCGAAGCTTTGGCTGAAGGTCGTGGCAAGGCCCGCGCCGACAG CCTCAAGGCCGGTAGCGAAGGCTTGAGCGCCCGGCGCAAAACCAGCAATGGCACGTTCCAGGTGGTGCCGGCCACCAGCC TGCGCAAAGGTGATGTGGTGCGTGTCGAAGCCGGGGAGATGATCCCCGGTGACGGCGAAGTGCTCGAAGGTATCGCAGCG GTCAACGAAGCGGCGATTACCGGTGAGTCGGCACCGGTGATTCGTGAGTCCGGCGGCGACCGCTCGGCCGTCACCGGCAA TACACGGCTGGTGTCCGACTGGCTGTTGGTGAAGATCACCGCCAACCCTGGCGAGTCGACCCTGGACCGCATGATCGCCC TGGTCGAAGGCGCCAAACGCCAGAAAACCCCGAACGAAGTGGCGCTCGACATCCTGCTGATCGGCCTGACCCTGATCTTC CTGCTGGTGGTCGTCACCCTGCAACCGTTCGCCCACTTCGCCAACGGCAGCCTGCCGCTGGTGTTCCTGGTGGCACTGCT GGTCACCTTGATTCCGACCACCATCGGCGGTCTGTTGTCGGCCATCGGTATCGCCGGCATGGATCGTCTGGTGCGCCTGA ACGTGATCGCCAAGTCCGGTCGTGCGGTGGAAGCGGCGGGGGACGTGCACGTCCTGCTGCTGGACAAGACCGGCACCATT ACCTTCGGTAACCGTCGTTGCTCGGCGGTGTATGCCGCGCCAGGCGTGACAGCCATGGAGTTGGCCGAAGGCGCGTTGCT GGCGTCGCTGGCCGACGACACCGCTGAAGGCAAGTCGATCGTCGAGTACCTGCGTGGCACTCATCCGCAACCGGAACCGT CCGCCGACCTGCTGACAGCCGTACCATTCAGTGCCGAAACCCGCTTGTCCGGTGTCGACTATCAAGGGCGCGTGTACCGC AAGGGTGCGGTGGATTCGTTGCTGGCCTTCGTCGGCCTGAAACGTGCTGACCTGGCACCGGCCTTGTCCCGCGAAATCGA CAAGATCGCGCAAAGCGGCGGCACCCCCTTGCTGGTCTGCGCCGACGGCAAGTTGCTCGGCGCGATCCACCTCAAGGACG TGGTCAAGCCCGGTATCCGCGAGCGTTTCGCCGAATTGCGCAAGCTGGGCATTCGCACGGTCATGGTCACCGGCGACAAC CCCTTGACTGCAGCCGCCATCGCCGCTGAGGCCGGTGTGGACGATGTGCTGGCGGAAGCCACGCCGGAGAAAAAACTGGC GCGCATTCGTCACGAGCAAAACGACGGGCGTCTGGTCGCCATGTGCGGCGATGGAGCCAACGACGCCCCGGCACTGGCCC AGGCGGACGTCGGCATGGCGATGAACGACGGCACGCAAGCGGCACGTGAAGCGGCCAACATGGTCGACCTCGACAGCGAC CCGACCAAGTTGCTGGATGTGGTGCAGATCGGCAAGGAATTGCTGGTTACCCGCGGTGCGCTGACGACCTTTTCCATCGC CAACGACGTGGCCAAGTACTTCGCGATCCTGCCGGCGCTGTTCGCCGCGATCTACCCGCAACTGGGTGTGCTCAACGTAA TGCACCTGAGCAGTCCGCAGAGCGCGATTCTGTCGGCGATCGTTTTCAACGCCTTGATCATTGTGGTGCTGATTCCCCTG GCATTGCGCGGTGTGCGCGTGCAGGCGGCGAGTGCGGCGGCGCTGTTGCGACGCAATCTGCTGATCTATGGCCTGGGCGG GATCCTGGTGCCGTTTGTGGGCATCAAGGCGATCGACATGCTGTTGACGGCGTTGCATCTGGTTTGA Protein sequence : MNMHVPASKPASPTKSAEAPKTAISALWRPALVQAFVKLDPRQLQRAPVMLVVELTAILTTVLCFIPDTAVPTFVAAQIA VWLWFTVLFANFAEALAEGRGKARADSLKAGSEGLSARRKTSNGTFQVVPATSLRKGDVVRVEAGEMIPGDGEVLEGIAA VNEAAITGESAPVIRESGGDRSAVTGNTRLVSDWLLVKITANPGESTLDRMIALVEGAKRQKTPNEVALDILLIGLTLIF LLVVVTLQPFAHFANGSLPLVFLVALLVTLIPTTIGGLLSAIGIAGMDRLVRLNVIAKSGRAVEAAGDVHVLLLDKTGTI TFGNRRCSAVYAAPGVTAMELAEGALLASLADDTAEGKSIVEYLRGTHPQPEPSADLLTAVPFSAETRLSGVDYQGRVYR KGAVDSLLAFVGLKRADLAPALSREIDKIAQSGGTPLLVCADGKLLGAIHLKDVVKPGIRERFAELRKLGIRTVMVTGDN PLTAAAIAAEAGVDDVLAEATPEKKLARIRHEQNDGRLVAMCGDGANDAPALAQADVGMAMNDGTQAAREAANMVDLDSD PTKLLDVVQIGKELLVTRGALTTFSIANDVAKYFAILPALFAAIYPQLGVLNVMHLSSPQSAILSAIVFNALIIVVLIPL ALRGVRVQAASAAALLRRNLLIYGLGGILVPFVGIKAIDMLLTALHLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 5e-146 | 59 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 4e-146 | 59 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-124 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-124 | 54 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 8e-126 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 9e-125 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-124 | 54 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-124 | 54 |
