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Name : lysS (PputUW4_01048) Accession : YP_007028060.1 Strain : Pseudomonas sp. UW4 Genome accession: NC_019670 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 1246223 - 1247725 bp Length : 1503 bp Strand : + Note : [J] COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGCGACCTAGAACTCGATCCGCAAGCCCTGCAACAGGAAGAAAACTCCCTGATCGCCCTGCGCAAGGAAAAGCTTGC TGCCGAGCGCGCCAAGGGCAATGCCTTCCCGAATGACTTCCGCCGCGAAAACTACTGCGAACAACTGCAGAAACAGTATG CGGACAAGACCAAGGAAGAGCTGGCAGAGGCTGCGATCCCGGTCAAGGTTGCCGGTCGTATCATGCTCAACCGTGGCTCG TTCATGGTGATCCAGGACATGACCGGTCGTATCCAGGTCTACGTCAATCGCAAGACCCTGTCCGAAGAAACCCTGGCCGC GGTGAAAACCTGGGACATGGGCGACATCATTGCCGCCGAAGGCACCCTGGCCCGTTCCGGCAAGGGTGACCTGTACGTTG AAATGACCAACGTGCGCCTGCTGACCAAATCCCTGCGCCCGCTGCCGGACAAGCACCACGGCCTGACCGACACCGAACAG CGCTACCGCCAGCGCTACGTTGACCTGATCGTCAACGAAGACGTGCGCCAGACGTTCCGCGTGCGTTCGCAAGTCATCGC CCACATCCGCAGCTTCCTGATGAAGCGTGACTTCCTGGAAGTGGAAACGCCGATGCTGCAGACCATTCCGGGCGGCGCGG CAGCCAAGCCGTTCGAAACCCACCACAACGCGCTGGACATGGAAATGTTCTTGCGCATTGCGCCTGAGTTGTACCTCAAG CGGCTTGTTGTCGGCGGGTTTGAAAAAGTGTTCGAGATCAACCGCAACTTCCGTAACGAAGGCGTTTCGACTCGTCACAA CCCTGAATTCACCATGTTGGAGTTCTACCAGGCCTACGCCGACTACGAAGACAACATGGACCTGACCGAAGAGTTGTTCC GTGAACTGGCGCAGCTGGTTCTGGGCAGCACCGACGTGCCGTACGGCGACAAGGTGTTCCACTTCGGCGAGCCGTTCGTG CGCCTGTCGGTATTCGACTCGATCCTCAAGTACAACCCCGAGCTGACCGCTGACGACCTGAACGACATCGACAAGGCTCG CGCCATTGCCAAGAAAGCCGGCGCCAAGGTGCTGGGCTTCGAAGGCCTGGGCAAGCTGCAGGTGATGATTTTCGAAGAGC TGGTCGAGCACAAGCTGGAACAGCCGCACTTCATTACCCAGTATCCGTTCGAAGTGTCGCCACTGGCACGTCGTAACGAC GAGAACCCGAACGTCACCGACCGATTCGAGCTGTTCATCGGTGGTCGTGAAATCGCCAACGCCTACTCCGAGTTGAACGA CGCGGAAGACCAGGCCGAGCGCTTCATGGCCCAGGTGGCCGACAAGGACGCCGGCGACGACGAAGCCATGCACTACGACG CTGACTTCGTGCGTGCGCTGGAGTACGGCATGCCGCCAACGGCGGGTGAAGGCATCGGTATCGACCGTCTGGTGATGCTG CTGACCAACTCCCCGTCGATCCGCGACGTGATCCTGTTCCCGCACATGCGGCCGCAAGCGTAA Protein sequence : MSDLELDPQALQQEENSLIALRKEKLAAERAKGNAFPNDFRRENYCEQLQKQYADKTKEELAEAAIPVKVAGRIMLNRGS FMVIQDMTGRIQVYVNRKTLSEETLAAVKTWDMGDIIAAEGTLARSGKGDLYVEMTNVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGSTDVPYGDKVFHFGEPFV RLSVFDSILKYNPELTADDLNDIDKARAIAKKAGAKVLGFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRND ENPNVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-134 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 6e-77 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_007028060.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-134 | 60 |
