Gene Information

Name : pdhD (Bdt_0740)
Accession : YP_007021714.1
Strain : Bdellovibrio bacteriovorus Tiberius
Genome accession: NC_019567
Putative virulence/resistance : Unknown
Product : dihydrolipoamide dehydrogenase, E3 subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 754027 - 755448 bp
Length : 1422 bp
Strand : -
Note : -

DNA sequence :
ATGCAAAATTTTGACGTAGTAGTTATTGGTGCGGGTCCGGGCGGTTATGTGGCTGCGATCCGTTCCGCACAACTTGGTTT
TAAAACAGCAGTTATCGAACGTGAATTCCTGGGTGGCGTGTGCTTGAACGTGGGTTGTATCCCGTCCAAAGCCATGATCA
CTGCGACTCACCTTTTGCACAAAGCTCAGCACAATTTCAAAGAAATGGGCTTGAACATCAAAGGTGGCATCGACGTGGAC
ATGAAACAACTTGTGAAATGGAAACAATCCGTTTCTGACAAGATGTCCGGCGGTGTGAACCAGCTTCTTAAAGGTTATGG
CGTCACCATCATCAAGGGTGAAGCTGAATTCAAGACCTCCAAAGAAATCTCTGTGAAGTCTTCTGCCGGCACTGAAGCAG
TTCAGGCGAAATACTTCATCGTGGCAACAGGTTCCCGTCCGATTGAAATCCCTGGTTTCAAATTCGACGAAAAAGATATC
TGTTCTTCCACGGGCGCATTGGCGTTCGACACCATCCCTAAGCGCGTGGCGGTTATCGGTGGTGGTTACATCGGTCTGGA
AATCTCTTCTTACCTGCGTAAGTTGGGCACTGAAGTGACTGTGATTGAAGCTCAGACAGCATTGCTAGCGGGCGTGGTTG
ATCCGGATTGCGCTCAGATCGTGACTCGCAAACTGACTAAAGCGGGCGTGAATGTTCTTTACGGAGCAAAAGCCAAAGGT
CAGAAAAAAGTCAAAGACGGTTACGAAGTCACTGTCGAGATCAACGGCAAAGACGAAGTTGTTAAATGCGACAAAATCCT
TGTAACCGTAGGCCGTCGTCCAAATGGCGATCAGGCGAATCTGAAAGCGGCTGGCATTGCTGTTGACGAGCGTGGCTTCG
TGAAAGTCGATGCTCAACGCCGCACGAATGTTTCAAACATCTTCGCTATCGGTGATATCTGTGGTCAGCCAATGCTGGCG
CACAAAGCATCCCATGAAGGTGTCCTTGTTGCTGAAGTGATCGCGGGCCATAACCGTGTTTACGATGCGAAAACAGTTCC
AGCTGTTGTCTTCACGGATCCTGAAATCGCAGCAGCCGGCATGACTGAAGCTGAAGCAAAAGCCAAAGGTCACACAGATC
TTCTGATCAGCAAGTTCCCGTTCGCAGCCAACGGCCGCGCGGTGAGCATGATGGAAACAGACGGTTTCGTGAAAATGATC
GCTGATAAGAAAACCCACGTATTGTTGGGCGTTCACATCGTCGGTCCGGAAGCTTCCAACTTGATCTCTGAAGCAGTTCT
GGCGATTGAAATGGGCGCTCGTATCGAAGACCTGGCTCTTTCCATCCACCCTCACCCAACTCTGGGTGAAACCATGATGG
AAGCCGCTGAGGCGACTTTGGGTCACGCGATCCATATCATTCAAAAACCTTTGAAAGCCTAA

Protein sequence :
MQNFDVVVIGAGPGGYVAAIRSAQLGFKTAVIEREFLGGVCLNVGCIPSKAMITATHLLHKAQHNFKEMGLNIKGGIDVD
MKQLVKWKQSVSDKMSGGVNQLLKGYGVTIIKGEAEFKTSKEISVKSSAGTEAVQAKYFIVATGSRPIEIPGFKFDEKDI
CSSTGALAFDTIPKRVAVIGGGYIGLEISSYLRKLGTEVTVIEAQTALLAGVVDPDCAQIVTRKLTKAGVNVLYGAKAKG
QKKVKDGYEVTVEINGKDEVVKCDKILVTVGRRPNGDQANLKAAGIAVDERGFVKVDAQRRTNVSNIFAIGDICGQPMLA
HKASHEGVLVAEVIAGHNRVYDAKTVPAVVFTDPEIAAAGMTEAEAKAKGHTDLLISKFPFAANGRAVSMMETDGFVKMI
ADKKTHVLLGVHIVGPEASNLISEAVLAIEMGARIEDLALSIHPHPTLGETMMEAAEATLGHAIHIIQKPLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0077 NP_763632.1 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 Not tested SCCpbp4 Protein 1e-95 47