Gene Information

Name : tetA (Bdt_0622)
Accession : YP_007021597.1
Strain : Bdellovibrio bacteriovorus Tiberius
Genome accession: NC_019567
Putative virulence/resistance : Resistance
Product : tetracycline-efflux transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 631430 - 632629 bp
Length : 1200 bp
Strand : -
Note : -

DNA sequence : 
ATGACAAAGAAAACTGCAGGCATCTGGTTTATTTTTATCACCGTGACTTTGGACATGATCGGACTGGGTTTGGTGATCCC
GTCCCTTCCGGACATCATGCGCCGTTTTGTATCCAGTGAAACCTCGGTCACGGAATACTTTGGCTATTTCATTTCGATTT
ATGCGTTGATGCAGTTTCTGGCCTCGCCACTTTTGGGGGCCTTGTCGGACCGCTTCGGTCGCCGATCCGTATTGTTGATT
TCACTTTTGGTGGCGGGCTTTGACTATATCCTGATGGCTTATGCTCCCACGCTTGAGATCCTTTTTGCCGGACGAATCAT
CGCCGGCCTGACAGGAGCCAACATCACCGTGGCGATGGCTTACATTGCCGACGTCAGTAATGATGAAAATCGTTCGGCCA
ACTTCGGGATGGTGGGCGCCGCCTTTGGATTGGGCTTTATTATCGGCCCGGCTATCGGGGGACTTTTGGGGCACTTGGGG
CCTGAGTATCCGTTCCTGGTGGCAGCAGGCTTGAATCTGCTGAATTTCTTCTTTGGTTTGTTCGTTCTGCCGGAATCACT
TCCAAAAAACATGCGACGCAAAATCGACTTGCGTCGTACCAATCCGCTTTATTCGCTGGTGGGAATTCTGCGCTCTAAAC
ATCTGTTAGCTCTGTTGCTGGTTTACTTCTTCTTCCAGCTGGCAGGTCAGACACATCCTTCCATCTGGACGTTGTACACG
GAAACCCGGTACGGCTGGACAACAGCTCAAGTCGGTTTGTCTTTGGCCGTCGTGGGAATTTTATCCGCCATTGCCCAAGG
CTGGCTGACCCGACTGGTGATCCCCAAGTTCGGTGAACACCGCACGGTGGTGATCGGTTCGTTTGGTTATGCGATTTCAT
TTATCTTCTTTGGTTTGGCCACCGAGGGATGGATGATGTATGCGATTCTGATTTTGTCAGCGGTCTTCTGGACCTCCCCT
CCTGCATTGCAGTCTTTGATCAGTCAAAAAACACCACCGCAGGAACAAGGCGAGCTGCAAGGGTCTTTGGTCAGTCTTTC
CAGCCTGGCCGCGATCATCACTCCACTGGTGACAACAAAACTGTTCGCACATTTCTCTTCGAATCAGGAAGGTGCTCTCT
ACCTCCCCGGCGCACCATATTATTTTGGCGCGCTGATCTGTTTGATTTCATGGGCGATCATGTACCGCCGCAAAGCTTAA

Protein sequence : 
MTKKTAGIWFIFITVTLDMIGLGLVIPSLPDIMRRFVSSETSVTEYFGYFISIYALMQFLASPLLGALSDRFGRRSVLLI
SLLVAGFDYILMAYAPTLEILFAGRIIAGLTGANITVAMAYIADVSNDENRSANFGMVGAAFGLGFIIGPAIGGLLGHLG
PEYPFLVAAGLNLLNFFFGLFVLPESLPKNMRRKIDLRRTNPLYSLVGILRSKHLLALLLVYFFFQLAGQTHPSIWTLYT
ETRYGWTTAQVGLSLAVVGILSAIAQGWLTRLVIPKFGEHRTVVIGSFGYAISFIFFGLATEGWMMYAILILSAVFWTSP
PALQSLISQKTPPQEQGELQGSLVSLSSLAAIITPLVTTKLFAHFSSNQEGALYLPGAPYYFGALICLISWAIMYRRKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 8e-54 43
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 8e-54 43
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 1e-53 43
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 8e-54 43
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 8e-54 43
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 1e-53 43
tet(G) AAK02051.1 tetracycline resistance protein Not tested SGI1 Protein 1e-45 41
tetA(G) ABZ01843.1 TetA(G) Not tested SGI2 Protein 1e-45 41
tetA(G) AGK06974.1 TetA(G) Not tested SGI1 Protein 1e-45 41
tetA(G) AGK07104.1 TetA(G) Not tested SGI1 Protein 1e-45 41
tetA CAJ77034.1 Tetracycline resistance protein Not tested AbaR1 Protein 7e-47 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tetA YP_007021597.1 tetracycline-efflux transporter Y19114.gene.p01 Protein 3e-59 46
tetA YP_007021597.1 tetracycline-efflux transporter AF090987.gene.p01 Protein 4e-44 45
tetA YP_007021597.1 tetracycline-efflux transporter AY264780.2.gene3.p01 Protein 4e-51 44
tetA YP_007021597.1 tetracycline-efflux transporter NC_011586.7045189.p0 Protein 6e-50 43
tetA YP_007021597.1 tetracycline-efflux transporter CP001485.1.gene2821. Protein 5e-54 43
tetA YP_007021597.1 tetracycline-efflux transporter AF534183.gene.p01 Protein 4e-54 43
tetA YP_007021597.1 tetracycline-efflux transporter NC_010410.6002597.p0 Protein 5e-54 43
tetA YP_007021597.1 tetracycline-efflux transporter AF133139.gene.p01 Protein 5e-48 42
tetA YP_007021597.1 tetracycline-efflux transporter X75761.gene.p01 Protein 3e-53 42
tetA YP_007021597.1 tetracycline-efflux transporter AF133140.gene.p01 Protein 4e-47 41
tetA YP_007021597.1 tetracycline-efflux transporter NC_010410.6002612.p0 Protein 4e-47 41
tetA YP_007021597.1 tetracycline-efflux transporter AY743590.gene.p01 Protein 1e-48 41