Gene Information

Name : fliI (Bdt_3318)
Accession : YP_007024260.1
Strain : Bdellovibrio bacteriovorus Tiberius
Genome accession: NC_019567
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3529126 - 3530454 bp
Length : 1329 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGAACTTGAAATGAACCTGGATAAGTATTCTGACGTGATCCAGTCTGTCCACTTGACGAAGGACAGCGGTAAAGT
CACGGAAGTGAACGGGATGCTTATCAAAGGATATCTGCCGGGCGCAAGCGTTGGCAGTATCGTGTCCATCAATCCCAGCG
GGATGGAAAAATCCTTCCTGGCGGAAGTGGTGGGGTTCAAGGACAAGCATGTTCTGATGATGGCATTAAACGACATGAGA
GGCGTGGCCCTGGGATCGAAAATCGTCCTGGCCCGTCAGATCGCCACCGTGCGCGCAGGTGAAGAGCTTTTGGGCCGCGT
GGTGGATGGCCTGGGTCGTCCTTTGGATGCCTTGGGCGAAGTCGAAAATTTCCGTGAAGTTCCTTTGTACAGTGAAGTCC
GTAACCCTCTGGATCGTCGTCCGATTCGTGAGCCTATTGACCTGGGGATTCGTGCTATCAATGGCGCATTAACCGCAGGA
CTGGGTCAGCGTGTCGCTATTATGGCGGGTTCCGGTGTGGGTAAATCCGTATTGCTGGGCATGATGGCCCGGAATACGAA
TGCCGACGTCAACGTGATCGCCATGATCGGTGAACGTGGTCGTGAGGTGCGCGAATTTATCGAGCACGATCTGGGCCCGG
AAGGGATGAAAAGATCGGTTGTTGTCTGTGTGACCAGTGACCAAAGCCCGCTGCTGCGTATGCGTGGTGCTTATGTGGCG
ACGGCTCTGGCTGAATACTTCTCCTCTCAGGGGAAGAATGTCTTATTGATGATGGATTCGGTGACTCGTTTTGCGATGGC
TCAAAGGGAAATCGGTCTGAGCACCGGTGAACCGCCATCCCAGAAGGGTTACACCCCGAGCGTCTTTGCCACCCTGCCTA
AGCTCCTTGAGCGGGCCGGGTCCTTTGAGGGCGAAGGCAGTATCACCGGCTTCTATACGACGCTGGTGGAAGGGGATGAC
ATGAATGATCCGATCGGGGATTCCGTGCGTTCCATCGTGGACGGGCACATCGTTCTAAGCCGTTCGTTGGCGCAGAAGGG
TCATTTCCCGGCGATCGATATCATGCAAAGTGCCAGCCGGGTGATGCGGGCGGTGTCTTCGCCGGAGCACTCCAAACTGG
CGCAAAAGCTGCGTGAAACCCTGGCGGTCTATAAAGACGCCGAGGATTTGATCAACATCGGAGCCTACAAGCCGGGATCC
AATCCCAAGATCGACCGGGCCGTGAAGGTGATTGATCAGGTGAACGACTTCCTTAAACAGAGAGTCGAGGACCCGACCAA
CTTCACGCAGACTGTCCGTCAAATGCAACAGATTCTTATCAACGCCTAA

Protein sequence :
MSELEMNLDKYSDVIQSVHLTKDSGKVTEVNGMLIKGYLPGASVGSIVSINPSGMEKSFLAEVVGFKDKHVLMMALNDMR
GVALGSKIVLARQIATVRAGEELLGRVVDGLGRPLDALGEVENFREVPLYSEVRNPLDRRPIREPIDLGIRAINGALTAG
LGQRVAIMAGSGVGKSVLLGMMARNTNADVNVIAMIGERGREVREFIEHDLGPEGMKRSVVVCVTSDQSPLLRMRGAYVA
TALAEYFSSQGKNVLLMMDSVTRFAMAQREIGLSTGEPPSQKGYTPSVFATLPKLLERAGSFEGEGSITGFYTTLVEGDD
MNDPIGDSVRSIVDGHIVLSRSLAQKGHFPAIDIMQSASRVMRAVSSPEHSKLAQKLRETLAVYKDAEDLINIGAYKPGS
NPKIDRAVKVIDQVNDFLKQRVEDPTNFTQTVRQMQQILINA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-95 49
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-95 49
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-99 48
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-89 47
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 8e-90 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-74 47
unnamed AAL06369.1 EscN Virulence LEE Protein 5e-89 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 9e-92 46
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-90 46
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 7e-92 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 7e-92 46
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-92 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 8e-90 46
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 9e-90 46
escN AAK26715.1 EscN Virulence LEE Protein 1e-89 46
escN AAL57542.1 EscN Virulence LEE Protein 1e-89 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-84 46
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-88 45
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-88 45
escN AAC38383.1 EscN Virulence LEE Protein 2e-90 45
escN AAC31513.1 L0034 Virulence LEE Protein 3e-90 45
escN YP_003236088.1 translocator EscN Virulence LEE Protein 8e-90 45
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-90 45
escN NP_290268.1 hypothetical protein Virulence LEE Protein 4e-90 45
ECs4568 NP_312595.1 EscN Virulence LEE Protein 4e-90 45
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-90 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 2e-90 45
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-88 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-88 45
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-88 45
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-88 45
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-88 45
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 1e-83 45
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 4e-79 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 8e-80 45
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 6e-79 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 6e-76 44
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-84 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-78 44
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 4e-79 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 4e-79 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 9e-74 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 9e-74 42
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 4e-65 41
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 3e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_007024260.1 flagellum-specific ATP synthase VFG2144 Protein 6e-106 52
fliI YP_007024260.1 flagellum-specific ATP synthase VFG1254 Protein 2e-91 51
fliI YP_007024260.1 flagellum-specific ATP synthase VFG0048 Protein 1e-104 50
fliI YP_007024260.1 flagellum-specific ATP synthase VFG2499 Protein 4e-92 50
fliI YP_007024260.1 flagellum-specific ATP synthase VFG0390 Protein 5e-96 47
fliI YP_007024260.1 flagellum-specific ATP synthase VFG0192 Protein 7e-101 47
fliI YP_007024260.1 flagellum-specific ATP synthase VFG0730 Protein 1e-90 45
fliI YP_007024260.1 flagellum-specific ATP synthase VFG0812 Protein 2e-90 45
fliI YP_007024260.1 flagellum-specific ATP synthase VFG2331 Protein 5e-87 45
fliI YP_007024260.1 flagellum-specific ATP synthase VFG0515 Protein 8e-89 45
fliI YP_007024260.1 flagellum-specific ATP synthase VFG1008 Protein 2e-69 42
fliI YP_007024260.1 flagellum-specific ATP synthase VFG2459 Protein 4e-69 41