Gene Information

Name : Bdt_3213 (Bdt_3213)
Accession : YP_007024155.1
Strain : Bdellovibrio bacteriovorus Tiberius
Genome accession: NC_019567
Putative virulence/resistance : Unknown
Product : insertion element IS2 transposase InsD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3418537 - 3419289 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence :
ATGCCTCGCCATTACCAAAAATCAGACGATCAAATAATTTTAGAAGAAATCAAAGCCGTTATTGCAATTAGAGCCACCTA
TGGCTACCGCCGGGTGACAACGATGGTGAATCGCCAAAGATCCCTTGATGGTCGCAATAAGATCAATCGCAAGCGTGTTC
AAAGAATCATGCGCATGAATGGTCTTTCATTGCCACAAACAATGCCACAGCCAAAAAGGCCACATACGGGAGTTGTTATG
ACTATGTTCCCGAATCTGCGTTGGTGTTCAGATGGCATGGAAATCCGCTGTTTTAACGGCGACAAAGTTTTCGTGGCGTT
TGCTTTGGATTGTTGTGATCGCGAAGCATTTGCTTACGTCGCTAGGACTGAGCCGCTATCAGCTACCGACATAGAGGAAT
TGATGGTTAAAGCTGTTGAAGCGAGATTTGGTGAGTCATTGAGATGTCCTCGCGAAATTCAGTGGTTGTCAGATCGAGGG
TCAATTTACCGTGCGAAGTCCGTGAAGGATCTTGGCAAAGAGTTAAATCTGAATTGCTGTTACACCAGAGCCTACAGCCC
AGAATCCAACGGCATGGCTGAAGCATTCGTTAAAACAATCAAAAGGGATTACGTTTATCAGGCTGACTGTGACAGCGCAG
AGACGGTTCTCAAGCTTTTGCCGCAGTGGTTTGCAGATTATAACAATATTGCTCCGCACTCAGCACTTGGCATGAAGAGC
CCGGTCGAGTACAAAGGGTCCGTGAACTTTTAA

Protein sequence :
MPRHYQKSDDQIILEEIKAVIAIRATYGYRRVTTMVNRQRSLDGRNKINRKRVQRIMRMNGLSLPQTMPQPKRPHTGVVM
TMFPNLRWCSDGMEIRCFNGDKVFVAFALDCCDREAFAYVARTEPLSATDIEELMVKAVEARFGESLRCPREIQWLSDRG
SIYRAKSVKDLGKELNLNCCYTRAYSPESNGMAEAFVKTIKRDYVYQADCDSAETVLKLLPQWFADYNNIAPHSALGMKS
PVEYKGSVNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 3e-43 48
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 4e-43 48
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 1e-43 47
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 2e-42 47
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 2e-41 47
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 3e-42 46
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 2e-42 46
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 4e-43 46
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 3e-42 46
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 3e-42 46
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 3e-42 46
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 4e-42 46
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 3e-39 44
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 5e-31 42
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 5e-31 42
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 4e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bdt_3213 YP_007024155.1 insertion element IS2 transposase InsD VFG1732 Protein 2e-43 48
Bdt_3213 YP_007024155.1 insertion element IS2 transposase InsD VFG0649 Protein 1e-42 46
Bdt_3213 YP_007024155.1 insertion element IS2 transposase InsD VFG0621 Protein 1e-42 46
Bdt_3213 YP_007024155.1 insertion element IS2 transposase InsD VFG0608 Protein 1e-42 46