Gene Information

Name : lysS (Bdt_2291)
Accession : YP_007023241.1
Strain : Bdellovibrio bacteriovorus Tiberius
Genome accession: NC_019567
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2399058 - 2400536 bp
Length : 1479 bp
Strand : -
Note : -

DNA sequence :
ATGAGCATCAATGAAAATCCGCTAAGAGCGGAGAAACGTAAAAAACTTCATGCCCTTCGCGAGAAAGGCATCAACCCGTA
TCCCTACGTCTTTGAAAACAAGGCGAAGATCTCTGAAGTGGTGGCTGAACATTCTGCCACTTTGCAGGCGGGTGAAAAGA
AGCCGGAATTCTCTTACCGTATTGCAGGTCGCCTGATGACCCTTCGTATGATGGGTAAGGCTTCTTTCTTCAATATTCAG
GATCAGACCGGCACAGTGCAAGTGTACGTGAAAGTGGAAGAGCTTTCTGAACAGGACCGCGCGGCTTTTGAACTGGTGGA
TCTGGGTGACATCGTCGGTATCGACGGTTTCGTCTTCAAATCCCAAAAAGGTGAATTCTCCATTTACGCAAAATCTTTCC
AGATTCTGACGAAAACCATCGAACCTTTGCCGGAAAAATTCCACGGCGTTCAGGATATCGAAATCAAGTATCGTCACAGA
CATTTGGATTTGATGACCGATGCGGATTCCCGCAAGGTGTTTGAAACACGCTCCAAGATCATCAAAGAAGTTCGTCGCTT
CCTTGATGACCGTGGTTTTATGGAAGTGGAAACTCCAACTTTGCAGCCGGTTTACGGCGGTGCTGCGGCGACTCCGTTCA
CCACGCACCACAAAGCTTTGGACATGAAACTTTACATGCGTATCTCGCCGGAACTTTATCTGAAACGCCTGATCGTGGGT
GGTTTTGAGAAAGTTTACGAAATCAGCAAAAACTTCCGTAACGAAGGTATCGACCGCACTCACAACCCGGAATTCGCGTT
GCTTGAGTTCTACGAGGCCTACACGGACTACAACTATCAGATGAAACAGTTCGAAGAACTGATCTCTTCTTTGGCTTTGA
AAATCACCGGCAGCATGAAGGTGACTTATCAGGGTAAAGAGCTTGATTTCACTCCTCCGTGGAGACGTCTGACGGTTCAT
GACGGTGTTAAAGAATACGCGGGCATTGATCCGGACAAGGCAACAGATCAAGAGATCTTCCAGGCCATCCGCAAAAACGG
TGGCGATATCGATGAGCCGGGTAAACGCGGCGAAATGATCATGGAACTGTTTGAACTGACGGCCGAACAGCACCTGGTGC
AGCCGACATTCGTGATGGATCACCCGGTGGAGATTTCTCCGCTGACGAAGATTCACCGTCGCGACAGCCGACTGGTTGAG
CGTTTCGAGCCGTTCGCAGCCTGCATGGAAATCGGGAACGCTTACTCTGAGCTGAATGATCCGGAAGACCAGTTGGCGCG
CCTGAAAGACCAGGAAGCCAACCGTGCGAAGGACGAAGAAGCTCACCCGATGGACGAAGACTTCCTGCTGGCGATCGACG
CTGGTATGCCGCCGACAGGGGGCGTGGGAATCGGTATCGAGCGTATCGTGATGCTGCTGACAGATCGTCCAAGTATCCGC
GATATCATCTTCTTCCCGACGATGAGAATCACAAAATAG

Protein sequence :
MSINENPLRAEKRKKLHALREKGINPYPYVFENKAKISEVVAEHSATLQAGEKKPEFSYRIAGRLMTLRMMGKASFFNIQ
DQTGTVQVYVKVEELSEQDRAAFELVDLGDIVGIDGFVFKSQKGEFSIYAKSFQILTKTIEPLPEKFHGVQDIEIKYRHR
HLDLMTDADSRKVFETRSKIIKEVRRFLDDRGFMEVETPTLQPVYGGAAATPFTTHHKALDMKLYMRISPELYLKRLIVG
GFEKVYEISKNFRNEGIDRTHNPEFALLEFYEAYTDYNYQMKQFEELISSLALKITGSMKVTYQGKELDFTPPWRRLTVH
DGVKEYAGIDPDKATDQEIFQAIRKNGGDIDEPGKRGEMIMELFELTAEQHLVQPTFVMDHPVEISPLTKIHRRDSRLVE
RFEPFAACMEIGNAYSELNDPEDQLARLKDQEANRAKDEEAHPMDEDFLLAIDAGMPPTGGVGIGIERIVMLLTDRPSIR
DIIFFPTMRITK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-97 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_007023241.1 lysyl-tRNA synthetase VFG1668 Protein 2e-97 43