Gene Information

Name : Bdt_2106 (Bdt_2106)
Accession : YP_007023058.1
Strain : Bdellovibrio bacteriovorus Tiberius
Genome accession: NC_019567
Putative virulence/resistance : Virulence
Product : NtrC family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2209594 - 2211003 bp
Length : 1410 bp
Strand : -
Note : -

DNA sequence : 
ATGGACTCTCAAAAAACGATCCTGCTTATTGAAGATGATTTGGATTTGGCAGAGCTTGCAACAGCGTACTTCCGCCAAAA
AGGCATTCAGGTTTTGCATATGGAAGACCCTTTGGAGGCTTTGAAATCCATCACTTCCAAAAAGCTGGTTCCTGATGCCA
TCATCACGGATTTGAATCTGCCCTTGATGTCGGGCCTGGATTTTATCAAAGCTGCTCGCAATGAAGGTGTGGCGCTTCCG
ATTATTCTGATCACCGTTTCCAACGATGTCGACACGGCGGTGGAAGCCATCAATGCCGGCGCTTATGACTTTGTGGTGAA
ACCACTGCATTTCCCTCAGCTTTTAATTTCTGCGCAACGGGCATTCAAATTTAATTCCTTGAATGAAGAAAATGAAAACC
TGCGCCAGACTCTGGATTTCAGCAAAGGTGTGAATCCTGATGGCATCATCGGAAAAAGTGATGCGATTCGCAAAGTCGTG
GATCTGGCCCGCCGGGTGGCGAAGAGCGCTTCGACCGTTTCGATCACTGGTGAAAGTGGCACGGGGAAAGAAGTCTTTGC
CAAAGCCATTCATAACTGGAGTCCGCGCGCCAAGAAACCTTTTGTGGCGATCAACTGTTCAGCCATTCCGGAAAATCTTC
TGGAATCTGAATTGTTCGGTCACGCCAAGGGATCTTTCACCGGTGCGGTGGAAAAGAAAGTCGGTCTTTTTGAAGAAGCC
GACGGCGGCACATTGTTTCTGGATGAAATCGGGGATTTGAATCTGTCCTTGCAGGCCAAGCTTTTGCGCGTTTTGCAAGA
GCGCGAAATCAAGCGGGTGGGTGAAAATCAGTCCCGTTCGGTGGACGTGCGCGTGATCGTGGCGACCCATAAGGATCTTC
GTCAGGAAGTCGCGGAAAAACGTTTCCGTGAGGACTTGTATTTCCGTCTGAATGTGATTCCGGTGAAACTTCCGCCGCTG
CGGGATCGTCGTGAGGACATTCTGCCTTTGGCAGAGCATTTCCTGAAAAAATACAACGCCATCAATGGCACTCAGGTGCA
GGGGTTTAAAAAATCCGCCAAAGAGTTTTTGCTGACTCAAGGCTGGCGCGGAAACGTGCGCGAACTTGAAAATGCCATTG
AACGGTCCGTGGTTCTTTCATCCGGGGCCGAGATTGATGTTGCGGCCTTCACTCTTTTTGATGAACCGGCATTGCAGGAT
GCTTTCTTAAGTACAGAGGATAAAAAGAACGCCTTTGTTTTTCATTTCGGTGACGAGGTCGAACCTTTGCACGAGCTGGA
AAAGAAATACGTGCAATTCGTCTATGAAAGAAAAAATCGCGCAAAAGAACTGACGGCCAAAGCTCTCGGTATTGATCGAA
AAACCCTGTATCGCAAACTGCAGGAAATTGACCCGCAGGTTTCCGTCTAG

Protein sequence : 
MDSQKTILLIEDDLDLAELATAYFRQKGIQVLHMEDPLEALKSITSKKLVPDAIITDLNLPLMSGLDFIKAARNEGVALP
IILITVSNDVDTAVEAINAGAYDFVVKPLHFPQLLISAQRAFKFNSLNEENENLRQTLDFSKGVNPDGIIGKSDAIRKVV
DLARRVAKSASTVSITGESGTGKEVFAKAIHNWSPRAKKPFVAINCSAIPENLLESELFGHAKGSFTGAVEKKVGLFEEA
DGGTLFLDEIGDLNLSLQAKLLRVLQEREIKRVGENQSRSVDVRVIVATHKDLRQEVAEKRFREDLYFRLNVIPVKLPPL
RDRREDILPLAEHFLKKYNAINGTQVQGFKKSAKEFLLTQGWRGNVRELENAIERSVVLSSGAEIDVAAFTLFDEPALQD
AFLSTEDKKNAFVFHFGDEVEPLHELEKKYVQFVYERKNRAKELTAKALGIDRKTLYRKLQEIDPQVSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-63 46
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-63 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bdt_2106 YP_007023058.1 NtrC family transcriptional regulator BAC0089 Protein 2e-75 48
Bdt_2106 YP_007023058.1 NtrC family transcriptional regulator BAC0467 Protein 2e-75 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Bdt_2106 YP_007023058.1 NtrC family transcriptional regulator VFG1249 Protein 2e-69 49
Bdt_2106 YP_007023058.1 NtrC family transcriptional regulator VFG1214 Protein 3e-65 44
Bdt_2106 YP_007023058.1 NtrC family transcriptional regulator VFG0116 Protein 2e-67 43