Name : Bdt_1589 (Bdt_1589) Accession : YP_007022551.1 Strain : Bdellovibrio bacteriovorus Tiberius Genome accession: NC_019567 Putative virulence/resistance : Virulence Product : pili biogenesis protein PilB-like ATPase Function : - COG functional category : - COG ID : - EC number : - Position : 1681815 - 1683509 bp Length : 1695 bp Strand : - Note : - DNA sequence : ATGGCCTCCGTGGATGTTTCAACGATACTTGCCAAATCGACCTCTTTAACACAGGACCAAATCCGTTCTGTGTTAAACAA CCCTTCGGTGGTGAGACCCGTCACCGTCGGCGAGGCTTTGGCTGCGAAGGAATTTTCCACGGCGGATGAAGTGGTCTCCG ATCTGTGCAAAGAACTGGGCCTGGATTTTATCCGGGACATCCCCGTCAGCGAGATCGCAGTCGACTTGATCCGGGACCTT CCTATCAACTACGCAAAACAGCACAACGTCCTTCCCTACAAGGAAGACGCGGACCTGCTGGTGGTACTGACCAGTAATCC GGTGAACCTCAAAGCCCTGGATGACATGAAGGTGCTGTTCGGAAAGCGCGTGCGCCCTCTGATCACCACCTCCAGCCGTG TTCAGGATGCGATCAATAAAGTTTACGAAAAAAGCACCGCGAATCTTTCGGGTCTGGATGAAATCGCCGAAGAAGATTAC GACCTGGATGATCCTATCGTGGATTTGCTTGAGGCCGGCGAAGATGACGCTCCGGTGATCAAGATGGTGAACAGCCTTCT ATTCCGTGCGGTGAAAGAAAAAGCGTCTGATATCCACATCGAGCCTTATGAAAAAGACATGGCCGTGCGCTTCCGTACGG ACGGTATTTTGTTCGACGTGTTCAAACCACCTAAAAAGCTTCAAAACGCCATCACGTCCCGTATCAAAGTTATGGCCAAT CTGAACATCGCCGAAAAGCGTTTGCCCCAGGACGGTCGTATTCCTTTGAAAGTCGGTGGTAAAGATATCGATATTCGTCT GTCTTGCGTCCCTACCACGTTCGGTGAGCGTCTGGTTATGCGTATTCAAGACAGGTCTTCTGTGGTGCGCGAACTGGCGG CTTTGGGCTTCTCTCAGGATAATCTGTCCAAAATGGAAGAGGACATCCTGACCAGATCCTACGGGATCTTCCTGGTTACG GGTCCGACGGGTTCTGGTAAGTCCACCACTTTGTATGGTGCCCTTTCCAAGCTGAATCAGCCTGACGTGAATATCCTGAC AGTTGAAGATCCGGTGGAGCAACGTATCCACGGTATCGGTCAGGTGCAAGTGAACTCAAAGATCGGCCTGACTTTCGCAG CCGGCCTTCGTTCCTTCCTTCGTCAAGACCCTGACATCATCATGGTCGGTGAGATTCGTGACTTGGAAACAGCCGAACTG GCGATCCAGGCCTCTTTGACGGGTCACTTGGTTCTATCCACACTGCATACGAATGACTCCGCCGGGGCCTTCCCCCGTCT GATCGACTTCGGGGTTGAGCCGTTCCTGATTGCAACTTCCATCACGGGTGTTATCGCCCAGCGTTTGGTGCGTGTTCTTT GCCCGCACTGTAAAGCCCCGCATGAAGCCACGGATTTCGAAATTCAGCTGCTGGGTATCACTCGCGAAGAAGCCAACAAG GCCAATATCTGCAAAGCAATGGGTTGCAACCACTGCTCGCAGAAAGGTTATTCCGGTCGTACCAATATTGGAGAGTTGAT GATCGTAACGGATGACATCCGCTCATTGATCATGCAGCGTAAAGACGGTAATACAATTAAAAGACAAGCAGTTGCCAACG GAATGAGGACCTTCCGTGACCACGGGATTCAAAAAGTCCTTGCGGGTATCACGACAATTGAAGAACTGACCTCCAATACG CAACTGGATATTTAA Protein sequence : MASVDVSTILAKSTSLTQDQIRSVLNNPSVVRPVTVGEALAAKEFSTADEVVSDLCKELGLDFIRDIPVSEIAVDLIRDL PINYAKQHNVLPYKEDADLLVVLTSNPVNLKALDDMKVLFGKRVRPLITTSSRVQDAINKVYEKSTANLSGLDEIAEEDY DLDDPIVDLLEAGEDDAPVIKMVNSLLFRAVKEKASDIHIEPYEKDMAVRFRTDGILFDVFKPPKKLQNAITSRIKVMAN LNIAEKRLPQDGRIPLKVGGKDIDIRLSCVPTTFGERLVMRIQDRSSVVRELAALGFSQDNLSKMEEDILTRSYGIFLVT GPTGSGKSTTLYGALSKLNQPDVNILTVEDPVEQRIHGIGQVQVNSKIGLTFAAGLRSFLRQDPDIIMVGEIRDLETAEL AIQASLTGHLVLSTLHTNDSAGAFPRLIDFGVEPFLIATSITGVIAQRLVRVLCPHCKAPHEATDFEIQLLGITREEANK ANICKAMGCNHCSQKGYSGRTNIGELMIVTDDIRSLIMQRKDGNTIKRQAVANGMRTFRDHGIQKVLAGITTIEELTSNT QLDI |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-103 | 45 |
gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-104 | 45 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Bdt_1589 | YP_007022551.1 | pili biogenesis protein PilB-like ATPase | VFG0182 | Protein | 9e-102 | 49 |
Bdt_1589 | YP_007022551.1 | pili biogenesis protein PilB-like ATPase | VFG2048 | Protein | 1e-105 | 46 |
Bdt_1589 | YP_007022551.1 | pili biogenesis protein PilB-like ATPase | VFG1876 | Protein | 1e-97 | 44 |
Bdt_1589 | YP_007022551.1 | pili biogenesis protein PilB-like ATPase | VFG0112 | Protein | 1e-91 | 44 |
Bdt_1589 | YP_007022551.1 | pili biogenesis protein PilB-like ATPase | VFG1880 | Protein | 4e-89 | 43 |