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Name : pilB (Bdt_1498) Accession : YP_007022461.1 Strain : Bdellovibrio bacteriovorus Tiberius Genome accession: NC_019567 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis protein PilB Function : - COG functional category : - COG ID : - EC number : - Position : 1584363 - 1586063 bp Length : 1701 bp Strand : + Note : - DNA sequence : ATGTCTTCACTCAAAATCGGGGAAATTCTAGTTAAGCAAGGTTTGCTCAAGCCTGATCAATTGGCATTGGCCATGGAAGA GCAGAAAAAAACCGGGCAGCGGCTGACGAATTCCATCATTCAACTCGGGTACTTAAAAGACAATCAGATCCTTCGCGCTG TTGAAAAACACTTCGCGGTTCCGGGGGTCGAGGTCAACACGTTTGAAATCGATGCAACCGTCATTGCAATGATTCCCAAA GATGTGTGCGAGAAAAACACATTGATCCCTCTGCAGAAAGCCGGGAACACCCTGGTTGTAGCGTTTGCGGATCCCTCTAA TATTATAGTCAAAGAAGATTTGCGTTTCATCACTCGTTGCCGCATCCAGGCGGTAGTGGGGACGGAAAGTGCCATCATGT CCGGTATTGAAAAATACTATGGCGGCAGTATCAGCACCAAGTCTTTGAACACCATGGGCGTGGGTGATGAGGATGACTTT ATCCTCAGTGCCGGTCCAGCGACGGAAGTCATCGATCAGGATGGCGGGTCGGAAGACGCGCCGATCATCAAGTTCGTGAA CTCGATCCTGGCCGATGCGATTCGTAAGAAAGTGTCTGATATCCACTTTGAACCTTACGAGAAAAAATACCGTGTGCGTT TCCGTATCGACGGTAACCTGGTGGAGGCGACCGCGCCTCCGGCAGGGACGGCGGCAGCGATTGCATCTCGTATTAAAATT ATGTCCAAGCTGGATATCGCTGAAAAACGCCGTCCGCAGGATGGTCGTTTGAAAGTGCGAACCAAAGCCAAAGAGATGGA TTTCCGTGTCAGCGTTCTGCCGACTCTTTGGGGTGAAAAAGTTGTTTTGCGTCTTTTGGATAAATCGAATTTGCAGCTGG ACATGACCAAGCTGGGTTTTGAAGAGGACGATTTGAAAATCTTTAAATCCACCATCAATCTGCCGCAAGGGATGGTTCTG ATCACGGGCCCGACGGGTTCGGGTAAAACGACAACGATTTATTCCGCCTTGGCGGAACTGAATCAGCCGGATGTGAATAT CTCCACCGCGGAAGATCCAGTGGAGTTCAACCTGGAAGGTATCAATCAGGTTCAGATGAATCCGGATATCGACCTGAATT TTTCCAGCGCTTTGAAATCCTTCCTGCGTCAGGATCCGGATGTCGTGATGGTGGGGGAGATTCGTGACCTTGAAACTGCC GAGATCGCCTTTAAAGCGGCCTCCACGGGTCACTTGGTCGTAAGCACCCTGCACACCAACGATGCACCGGGAACGGTCAT TCGTCTGACCGAAATGGGTGTGGCTCCGTATATTATCACTTCGACGGTAAATCTGATCGTGGCTCAGCGTCTGGTCGGTA AAGTCTGCGAATCCTGCAAAGCGCCGGTGGAAGTGCCAGCACAGACCCTGATGAACCTGGGCGTGCCTCAGGCTGAAATC GGAGACTACAAACTGATGCGTGGAAAAGGTTGCGCCAATTGCAACAACACCGGCATCAAAGGCCGTCTGGCGATTTACGA ATTGCTGGCAATGACCGAGAAAATGAAAGAGGCCATCTTGAAAGGTGCCTCGACCGGTCAGCTTCGCTTCCTGGCCCGTG AACAGGGGATGAGAACCCTGCGCCGAAGTGCGCTGTTAAAGTTAAAACGTGGCGTAACAACTATTGAAGAAGTGCTCAAC GCATCAGTGAAGGACACCTAA Protein sequence : MSSLKIGEILVKQGLLKPDQLALAMEEQKKTGQRLTNSIIQLGYLKDNQILRAVEKHFAVPGVEVNTFEIDATVIAMIPK DVCEKNTLIPLQKAGNTLVVAFADPSNIIVKEDLRFITRCRIQAVVGTESAIMSGIEKYYGGSISTKSLNTMGVGDEDDF ILSAGPATEVIDQDGGSEDAPIIKFVNSILADAIRKKVSDIHFEPYEKKYRVRFRIDGNLVEATAPPAGTAAAIASRIKI MSKLDIAEKRRPQDGRLKVRTKAKEMDFRVSVLPTLWGEKVVLRLLDKSNLQLDMTKLGFEEDDLKIFKSTINLPQGMVL ITGPTGSGKTTTIYSALAELNQPDVNISTAEDPVEFNLEGINQVQMNPDIDLNFSSALKSFLRQDPDVVMVGEIRDLETA EIAFKAASTGHLVVSTLHTNDAPGTVIRLTEMGVAPYIITSTVNLIVAQRLVGKVCESCKAPVEVPAQTLMNLGVPQAEI GDYKLMRGKGCANCNNTGIKGRLAIYELLAMTEKMKEAILKGASTGQLRFLAREQGMRTLRRSALLKLKRGVTTIEEVLN ASVKDT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-80 | 43 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-81 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_007022461.1 | type IV pilus biogenesis protein PilB | VFG0112 | Protein | 2e-111 | 46 |
| pilB | YP_007022461.1 | type IV pilus biogenesis protein PilB | VFG1880 | Protein | 7e-101 | 44 |
| pilB | YP_007022461.1 | type IV pilus biogenesis protein PilB | VFG2048 | Protein | 2e-81 | 44 |
