Gene Information

Name : dppD (Bdt_1211)
Accession : YP_007022177.1
Strain : Bdellovibrio bacteriovorus Tiberius
Genome accession: NC_019567
Putative virulence/resistance : Unknown
Product : dipeptide ABC transporter ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1279251 - 1280960 bp
Length : 1710 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAACACAAATATTATCGAAGTCCGCAATCTTGCTGTTGAGTTTAAAACCGAAGACGGGATTGTACAGGCCGTAAA
AGGCATCTCGTTCAACATCCCAAAAGGTAAAACAGTCGGGTTGGTGGGTGAGTCTGGTTCTGGTAAAAGTATCACGTCCC
TGGCGATCATGCGTTTGATCGGAAATCCAGGCCGTGTTTCCAGCGGCGAAATTCTTTTTGAAGGTCAGGACTTGTTGAAG
GTCTCTGAAAAGAAAATGCGTGAAATCCGTGGTGCACGCATCTCCATGATCTTCCAGGAACCGATGACTTCTTTGAATCC
GGTTCTGACCGTTGCGGATCAGATCACTGAAACTTTGATGCTTCACCAAAACCTGAACAAACAACAGGCTTTGGACAAAG
CTTTGGATCTGTTGAAACAGGTCGGCATTCCACACGCGGAAGAGCGTCTGTATTTCTATCCTCACAAATTCTCCGGCGGT
CAGCGCCAGCGTATCATGATCGCGATGGCGATTGCCTGCAATCCGGACGTTCTGATCTGTGACGAGCCAACCACAGCGCT
CGACGTGACGATCCAAAAACAAATTCTGGATCTTCTGGCCGACATTCAAAAAAGAACTCACATGAGTCTATTGTTCATCA
CCCACGATCTGGGTGTTGTTGCTGACATCGCTGATGAAGTGATCGTTATGAACAAAGGTGAAATCGTAGAACGTGGTGTT
TCCAAGGAAATCTTCGACAATCCAAAACACCCGTACACGAAGGGGCTTCTGGCCTGCCGTCCGTCTTTGGATGAAAACCC
GGTTCGTCTTCCGGTTCTTGCTGACTTCATGAGCGCGACCGGCGAAGAAATCACGCCAGTGGCAAAGGTTTACACTCCAG
CCAAAGAAATCATCCGCGAAGACAAAGTCATTCTTGAAGTGAATGACCTGAAAACCCACTTCCCTCACACCGGCGGTCTT
TTGGGCCGTGTTCAGAGCTACACAAAGGCTGTGGACGGCGTCAGCTTCAAAGTTAAAAAAGGCCAGACGCTGGGTCTGGT
GGGTGAATCCGGTTGCGGTAAAACGACTTTGGGCCGCACGCTGATGCGTTTGATTGAGCCGACTGATGGCCAGATCATCT
TCGATGGTCAGGACATCACCAAGCTTGATTACGGTCACATGCATCCGATTCGTAAAAAAATGCAGATCATCTTCCAGGAT
CCGTATGCTTCCTTAAATCCGCGTATGACCATCGGGACCATCCTGATGGAGCCAATGCAGATTCACAATATCGGTGACAA
CAACAACCAGCGCCGCGAAATTGCGGAAGAGATGCTGAAAAAAGTGGGCATGAGCCCGGCGATGATGAATCGTTACCCGC
ACGAGTTCTCTGGCGGTCAAAGACAGCGTATTTCCATCGCGCGTGCTTTGATGGTTCGCCCGGAATTCATCGTGTGTGAC
GAATCTGTATCCGCTCTGGACGTATCCATCCAGGCTCAGATTCTGAATTTGTTGTTGGATCTTCAGGACGAGATGAACCT
GACTTACATCTTTATCTCTCACGATCTGTCTGTGGTGAAATTCATCTCTGACGAAGTGGCAGTGATGTTCGGTGGTAAGA
TCGTTGAGCACAACACGGCTCAGGCGATTTACGATGCCCCTCAACACGACTACACGAAGAAGCTTCTAAGCGCGATTCCA
AAAGGGATCCCGAAAGAGCTGACAGTTTAG

Protein sequence :
MSNTNIIEVRNLAVEFKTEDGIVQAVKGISFNIPKGKTVGLVGESGSGKSITSLAIMRLIGNPGRVSSGEILFEGQDLLK
VSEKKMREIRGARISMIFQEPMTSLNPVLTVADQITETLMLHQNLNKQQALDKALDLLKQVGIPHAEERLYFYPHKFSGG
QRQRIMIAMAIACNPDVLICDEPTTALDVTIQKQILDLLADIQKRTHMSLLFITHDLGVVADIADEVIVMNKGEIVERGV
SKEIFDNPKHPYTKGLLACRPSLDENPVRLPVLADFMSATGEEITPVAKVYTPAKEIIREDKVILEVNDLKTHFPHTGGL
LGRVQSYTKAVDGVSFKVKKGQTLGLVGESGCGKTTLGRTLMRLIEPTDGQIIFDGQDITKLDYGHMHPIRKKMQIIFQD
PYASLNPRMTIGTILMEPMQIHNIGDNNNQRREIAEEMLKKVGMSPAMMNRYPHEFSGGQRQRISIARALMVRPEFIVCD
ESVSALDVSIQAQILNLLLDLQDEMNLTYIFISHDLSVVKFISDEVAVMFGGKIVEHNTAQAIYDAPQHDYTKKLLSAIP
KGIPKELTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-115 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-86 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-86 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 1e-86 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 1e-86 42