|
Name : hslU (HPAKL86_03905) Accession : YP_007018851.1 Strain : Helicobacter pylori Aklavik86 Genome accession: NC_019563 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : - COG ID : - EC number : - Position : 810676 - 811998 bp Length : 1323 bp Strand : + Note : COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit DNA sequence : TTGAATATGACCCCAAGAGAAATTGTCGCTTATTTAGATGAATACATCATTGGGCAAAAGGAAGCTAAAAAGTCTATCGC TATCGCTTTTAGGAATCGTTACAGGCGTTTGCAACTGGAAAAATCCTTACAAGAAGAAATCACGCCTAAAAACATTTTAA TGATTGGATCTACTGGCGTGGGTAAAACTGAAATCGCAAGAAGAATAGCAAAAATCATGAAACTCCCCTTTGTGAAAGTG GAAGCGAGCAAATACACAGAAGTGGGTTTTGTGGGGCGCGATGTGGAGTCTATGGTAAGGGATTTAGTCAATAACAGCGT GCTTTTAGTGGAAAATGAGCATAAAGAAAAACTAAAAGACAAGATTGAAGAGGCGGTTATAGAAAAAATCGCTAAAAAAC TCCTACCCCCCTTGCCTAATGGGGTGAGCGAAGAAAAAAAACAAGAATACGCTAACAGCCTTTTAAAAATGCAACAAAGA ATCGCGCAAGGCGAGTTGGATAGCCGAGAAATTGAAATTGAAGTGCGTAAAAAAAGCATAGAGATTGATTCTAATGTGCC GCCTGAAATTTTAAGGGTTCAAGAAAATGTGATCAAGTTTTTCCATAAAGAACAGGATAAAGTCAAAAAAACTTTAAGCG TTAAAGAGGCTAAAGAAGCCCTAAAGGCAGAAATTAGCGACACGCTTTTAGATGGCGAAGCCATTAAAATGGAAGGCTTG AAGCGCGCGGAAAGTTCAGGGGTGATTTTTATTGATGAAATTGATAAGATCGCTGTAAGCTCTAAAGAAGGAGGTCGTCA AGATCCCAGTAAAGAGGGGGTTCAAAGGGATTTGTTGCCGATTGTAGAGGGGAGTGTGGTGAATACGAAGTATGGTCCTA TTAAAACAGAGCATATTTTATTCATTGCAGCAGGGGCTTTTCATCTTTCTAAGCCAAGCGATCTCATCCCTGAATTGCAA GGGCGTTTCCCTTTAAGGGTGGAGTTAGAGAGTTTAACCGAAGAAATCATGTATATGATTTTAACCCAAACTAAAACCTC TATCATCAAGCAATACCAAGCCCTTTTAAAAGTGGAAGGCGTAGGAATTGCGTTTGAAGATGATGCGATCAAAGAGTTAG CCAAACTTTCTTATAACGCCAATCAAAAAAGCGAAGATATAGGCGCTAGAAGGTTGCACACCACCATTGAAAAAGTGCTA GAAGACATTAGTTTTGAAGCGGAGGATTATTCTGGGCAAAATGTTACTATCACTAAAGAGTTGGTCCAATCAAAACTAGA GGATTTGGTGGCTGATGAGAATTTAGTGAAGTATATTTTATAA Protein sequence : MNMTPREIVAYLDEYIIGQKEAKKSIAIAFRNRYRRLQLEKSLQEEITPKNILMIGSTGVGKTEIARRIAKIMKLPFVKV EASKYTEVGFVGRDVESMVRDLVNNSVLLVENEHKEKLKDKIEEAVIEKIAKKLLPPLPNGVSEEKKQEYANSLLKMQQR IAQGELDSREIEIEVRKKSIEIDSNVPPEILRVQENVIKFFHKEQDKVKKTLSVKEAKEALKAEISDTLLDGEAIKMEGL KRAESSGVIFIDEIDKIAVSSKEGGRQDPSKEGVQRDLLPIVEGSVVNTKYGPIKTEHILFIAAGAFHLSKPSDLIPELQ GRFPLRVELESLTEEIMYMILTQTKTSIIKQYQALLKVEGVGIAFEDDAIKELAKLSYNANQKSEDIGARRLHTTIEKVL EDISFEAEDYSGQNVTITKELVQSKLEDLVADENLVKYIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 0.0 | 98 |
