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Name : ureB (HPAKL86_05685) Accession : YP_007019189.1 Strain : Helicobacter pylori Aklavik86 Genome accession: NC_019563 Putative virulence/resistance : Virulence Product : urease subunit beta Function : - COG functional category : - COG ID : - EC number : 3.5.1.5 Position : 1195963 - 1197672 bp Length : 1710 bp Strand : + Note : COG0804 Urea amidohydrolase (urease) alpha subunit DNA sequence : ATGAAAATGAAAAAACTTGATTATGTCAATACTTACGGGCCCACTAAAGGGGATAAAGTAAGATTAGGCGATACAGAGAT TTGGGCAGAAGTGGAGCATGATTATACCATCTATGGTGAAGAGTTAAAATTTGGTGCAGGCAAGACTATCAGAGAAGGCA TGGGGCAAAGCAACAGCCATGACGAGAACACTTTGGATCTAGTGATCACCAACGCTCTCATTATTGATTACACCGGCATT TACAAAGCTGATATTGGGATCAAAAACGGCAAGATTGCAGGCATTGGTAAAGCAGGCAATAAAGACATGCAAGATGGCGT CAGCCCTAATTTAGTTGTAGGCGTAGGCACAGAAGCTTTAGCGGGCGAAGGCATGATTGTAACCGCTGGTGGGATTGATA GCCACACGCATTTTTTAAGCCCTCAACAATTCCCCACAGCTCTAGCTAATGGCGTGACTACGATGTTTGGCGGTGGGACT GGTCCGGTAGATGGCACGAATGCGACCACTATCACTCCAGGAGAATGGAATATCCACAGAATGTTAAGAGCCGCTGAAGA ATACGCCATGAATGTGGGGTTTTTAGGGAAAGGGAATTCTTCTAGCAAAACCCAATTAGTGGAACAAATTGAAGCGGGCG TTGTAGGCTTTAAATTGCACGAAGATTGGGGCACCACTCCTAGCGCGATTGATACATGCTTAAGCGTCGCTGATGAATAC GATGTGCAAGTGTGCATCCATACAGACACCGTGAATGAAGCCGGGTATGTGGAAGACACGCTCAATGCAATGAACGGACG CGCTATCCATGCATACCACATTGAAGGGGCAGGCGGAGGACATAGCCCAGATGTTATCACTATGGCCGGTGAAGAAAACA TCTTACCCAGTTCCACCACCCCAACCATTCCTTATACCATAAATACGGTTGCAGAACACTTAGACATGCTAATGACATGC CATCATTTGGATAAAAAAATCCGAGAAGATTTACAATTTTCCCAAAGCCGTATCCGCCCGGGCAGCATTGCAGCTGAAGA TGTTTTACATGACAATGGCATGATTGCTATGACAAGTTCGGATTCTCAAGCGATGGGGAGAGCGGGTGAAGTCGTTCCAA GAACTTGGCAAACCGCTGACAAAAACAAAAAAGAGTTTGGTCCTTTAAAAGAAGACGCTCAAAACGGGAATGATAATTTC CGCATCAAACGCTACATTTCTAAATACACCATCAACCCGGCTATTACGCACGGCGTGAGCGAATACATAGGCTCTGTGGA AGCGGGGAAAATCGCTGATTTAGTCGTGTGGAATCCGGCCTTTTTTGGGGTGAAACCTAAGATCATTATTAAAGGCGGTT TGGTCGTGTTCTCTGAAATGGGCGATAGCAACGCTTCTGTGCCAACCCCACAACCTGTTTATTACAGAGAAATGTTTGGT CATCATGGGAAGGCTAAGTTTGACACGAGCATCACTTTTGTCAATAAGCTCGCCTATGAAAAGGGCATCAAAGAAAAACT TGGCTTAGAAAGACAAGTATTGCCCATCAAAAATGTGCGCAACATCACTAAAAAAGACTTTAAATTCAACAACACGACAG GAAAACTCACCGTCGATCCCAAAACCTTTGAAGTCTTTTTAGATGGCAAGCTTTGCACTTCCAAGCCAGCGAGCGAATTG CCTTTAGCGCAACGCTACACTTTCTTTTAA Protein sequence : MKMKKLDYVNTYGPTKGDKVRLGDTEIWAEVEHDYTIYGEELKFGAGKTIREGMGQSNSHDENTLDLVITNALIIDYTGI YKADIGIKNGKIAGIGKAGNKDMQDGVSPNLVVGVGTEALAGEGMIVTAGGIDSHTHFLSPQQFPTALANGVTTMFGGGT GPVDGTNATTITPGEWNIHRMLRAAEEYAMNVGFLGKGNSSSKTQLVEQIEAGVVGFKLHEDWGTTPSAIDTCLSVADEY DVQVCIHTDTVNEAGYVEDTLNAMNGRAIHAYHIEGAGGGHSPDVITMAGEENILPSSTTPTIPYTINTVAEHLDMLMTC HHLDKKIREDLQFSQSRIRPGSIAAEDVLHDNGMIAMTSSDSQAMGRAGEVVPRTWQTADKNKKEFGPLKEDAQNGNDNF RIKRYISKYTINPAITHGVSEYIGSVEAGKIADLVVWNPAFFGVKPKIIIKGGLVVFSEMGDSNASVPTPQPVYYREMFG HHGKAKFDTSITFVNKLAYEKGIKEKLGLERQVLPIKNVRNITKKDFKFNNTTGKLTVDPKTFEVFLDGKLCTSKPASEL PLAQRYTFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-139 | 58 |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 2e-143 | 58 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 2e-143 | 58 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 2e-139 | 58 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-139 | 58 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-139 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ureB | YP_007019189.1 | urease subunit beta | VFG0270 | Protein | 0.0 | 73 |
