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Name : HPAKL117_04690 (HPAKL117_04690) Accession : YP_007017472.1 Strain : Helicobacter pylori Aklavik117 Genome accession: NC_019560 Putative virulence/resistance : Unknown Product : IS606 transposase Function : - COG functional category : - COG ID : - EC number : - Position : 986848 - 988146 bp Length : 1299 bp Strand : - Note : COG0675 Transposase and inactivated derivatives DNA sequence : TTGTATCCCACTAAAGAACAAGAAAGCAAACTGCAGCATTGTTTTTTTGTCTATAACCAAGCCTATAACATCGGCTTGAA TTTGCAACAAGAGCAGTATGAAAAGAATAAAGATTTACCCCAAAAAGAAAGAAAATGGAAAAAATCAAGCGAGTTAGATC ATGCGATCAAACAATGCCTAAGAGCTAGGGATTTACCCTTTAGCTCTGTGATAGCCCAACAATCACGCATGAATGTTGAA AGGGCTTTTAAAGACGCTTTTAAGGTTAAAAACAGGGGCTTTCCTAAATTCAAAAACTCCAAATTCGCCAAACAATCTTT TTCTTGGAATAATCAAGGCTTCTCTTTGAAAGAAAGCGCTGATGAACGCTTCAAGATATTCACTCTCATGAAAATGCCCT TGCTTTTGCGCATGCACAGAGATTTCCCCCCTAACGCTAAAATCAAGCAAATTACAATCTCTTGCAGCCACAGAAAATAT TTTGTTAGCTTTAGCGTGGAATACGAACAAGACACAACAACCATCAAAAATCCTAAAGATTGTGTGGGGATAGATTTGAA TGTCTTTGACATCGCTTGTTCTTGTGGTGTGAATAACCCTGAAAAACTCACTGATTTTAAGCGCTACCTTTTAGACATGG AAGAATTGCTAGGGATAAAGTTAGATGCAAAAACTCACGCAACACAGCTCATTCCCACTTATTCCAAACTGCATTCTTTA AAAAAATACTCCAAAAAATCTAAAAGATTGCAAAAAAAACAGAGCCGCAGGGTTTTAAAATCCAAACAGAACAAAACCAA ATTAGGAGGTAATTTTTACCAAACACAAAAGAGATTAAACCAAGCCTTTGACAAGTCTAGTCATCAAAAAACAGACCGAT ACCATAAAATCACAAGCGAACTTTCAAAGCAATTTGAATTGATAGCAGTTGAAGACTTGCAAGTAAAGAACATGACTAAA AGAGCTAAACTCAAAAATGTTAAACAAAAGAGGGGGCTTAATAAATCTATTCTCAACGCTTCATTCTATCAAATCATCTC CTTTTTAGACTACAAACAACAGCATAATGGCAAATTGTTAGTGAAAGTTCCCCCACAATACACCAGCAAGACTTGCTGTA ATTGTGGGAGCATCAACCCCAAGCTCAAATTGAATCACAGGCAATATTTGTGTCCTGATTGTGGGTATAAAGAACACAGA GATATTAACGCTGCGAACAACATCTTGAATAAAGGGTTAAGTCTTTTTAGGGCAGGAAATGTCCTTGCAGACTATAAAGA ACAAAGCCTTTCGTGTTAG Protein sequence : MYPTKEQESKLQHCFFVYNQAYNIGLNLQQEQYEKNKDLPQKERKWKKSSELDHAIKQCLRARDLPFSSVIAQQSRMNVE RAFKDAFKVKNRGFPKFKNSKFAKQSFSWNNQGFSLKESADERFKIFTLMKMPLLLRMHRDFPPNAKIKQITISCSHRKY FVSFSVEYEQDTTTIKNPKDCVGIDLNVFDIACSCGVNNPEKLTDFKRYLLDMEELLGIKLDAKTHATQLIPTYSKLHSL KKYSKKSKRLQKKQSRRVLKSKQNKTKLGGNFYQTQKRLNQAFDKSSHQKTDRYHKITSELSKQFELIAVEDLQVKNMTK RAKLKNVKQKRGLNKSILNASFYQIISFLDYKQQHNGKLLVKVPPQYTSKTCCNCGSINPKLKLNHRQYLCPDCGYKEHR DINAANNILNKGLSLFRAGNVLADYKEQSLSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | AAR03857.1 | transposase B-like protein | Not tested | cag PAI | Protein | 3e-159 | 85 |
| tnpA | CAJ31329.1 | insertion sequence IS606 transposase homolog A | Not tested | cag PAI | Protein | 4e-156 | 84 |
