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Name : HPAKL117_04190 (HPAKL117_04190) Accession : YP_007017375.1 Strain : Helicobacter pylori Aklavik117 Genome accession: NC_019560 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : - COG ID : - EC number : - Position : 865468 - 866982 bp Length : 1515 bp Strand : - Note : COG0753 Catalase DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACCGCTTTTGGCGCTCCCATTTGGGATGACAACAATGTGATTACAGCTGGCCC TAGAGGTCCTGTTTTATTGCAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGATCGAGAAAGGATCCCTGAAAGGG TAGTGCATGCTAAAGGAAGCGGAGCTTATGGCACTTTCACCGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAATTGGTAAAAAAACCGAATGCTTTTTCAGATTCTCTACTGTGGCAGGGGAAAGAGGTAGTGCGGATGCGGT GAGGGACCCTAGAGGTTTTGCGATGAAGTATTACACCGAAGAAGGTAACTGGGATTTGGTAGGGAACAACACGCCTGTTT TCTTTATCCGTGATGCGATCAAATTCCCTGATTTCATCCACACTCAAAAACGAGATCCTCAAACCAATTTGCCTAACCCC GACATGGTATGGGATTTTTGGAGTAATGTTCCTGAAAGTTTGTATCAAGTAACATGGGTTATGAGCGATAGGGGTATTCC TAAATCTTTCCGCCACATGGATGGTTTTGGCAGCCACACTTTCAGCCTTATCAACGCAAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTGAAACCATGCAAGGCGTTAAGCACTTGACCAATGAAGAAGCTGCAGAAATCAGAAAGCATGATCCTGAT TCCAATCAAAGGGATTTGTTCAATGCGATCGCTAGAGGGGATTTCCCAAAATGGAAATTAAGCATTCAAGTGATGCCAGA AGAAGATGCTAAAAAGTATCGATTCCATCCGTTTGATGTAACTAAAATTTGGTATCTCAAAGATTATCCATTGATGGAAG TGGGCATTGTAGAGTTGAATAAAAATCCTGAAAACTATTTCGCAGAAGTGGAGCAAGCGGCATTCACTCCGGCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGATAGGATGTTACAAGGGCGCTTGTTCTCTTATGGAGACACACACCGCTACCGCTT AGGGGTTAATTACTCTCAGATACCGGTTAATAAACCAAGGTGCCCGTTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ACGGGTATTATGGCGCTTTACAAAACTATACGCCTAGCTCATTGCCTGGCTATAAAGAAGATAAGAGCGCGAGAGATCCT AAACTCAATTTGGCTCATATTGAGAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGATGATAGCGATTACTACAC CCAACCAGGCGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGCATGACACTATTGGAGAGTCTTTAGCTC ATGTTACCCATAAGGAAATTGTGGATAAACAATTGGAGCATTTCAAGAAAGCTGACCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGAAATGCATGGAAAAGACATGCATATGAAAAAGAAAAAGTAA Protein sequence : MVNKDVKQTTAFGAPIWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKIGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNP DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFETMQGVKHLTNEEAAEIRKHDPD SNQRDLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLKDYPLMEVGIVELNKNPENYFAEVEQAAFTPANV VPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYSQIPVNKPRCPFHSSSRDGYMQNGYYGALQNYTPSSLPGYKEDKSARDP KLNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKEMHGKDMHMKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 2e-136 | 60 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 4e-91 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 4e-91 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 4e-91 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 4e-91 | 47 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 2e-93 | 47 |
