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Name : HPAKL117_03940 (HPAKL117_03940) Accession : YP_007017327.1 Strain : Helicobacter pylori Aklavik117 Genome accession: NC_019560 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.1.1.3 Position : 818087 - 819352 bp Length : 1266 bp Strand : + Note : COG0460 Homoserine dehydrogenase DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGCGGGTTTAGGGTGTGTGGGGAGCGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATTAAAGACAGAGCCGGCGTGGAAATTGTGATTAAAAAAGCGGTGGTGCGAGATGTGAAAAAGCGCAAAGGCT ATCCTTTTGAAATCAGTAATGATTTAGAAAGCCTGATAGAAGATGAAGAGATTGATATTGTCGTGGAGCTTATGGGTGGG GTGGAAGCGCCTTATCTTTTAGCCAAAAAAACTTTAGCCAAACAAAAAGCCTTTGTTACAGCCAATAAAGCCATGTTAGC GTATCACCGCTATGAATTAGAACAAATCGCTAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGTGGGGGTATCCCTA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCCAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACCAGCAATTAC ATTTTAAGCCAAATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGACGCCCAACATTTAGGCTATGCGGAATT AAACCCTGAATTTGACATTAAAGGCATTGATGCGGCGCACAAATTATTGATTTTAGCGTCTTTAGCCTATGGCATTGATG CAAAATTAGAAGAAATTTTAATTGAAGGCATTGAAAAAATAGAGCCAGACGACATGGAGTTTGCTAAAGAATTTGGTTAT AGCATTAAACTTTTAGGCATCGCTAAAAAGCACCAAGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAATGA ATGCATGCTCTCTAAAGTGGATGGGGTGATGAACGCTATAAGCGTTATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTCTA ATGCTAGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGCGCGTTTGTT GGTAAGCGATGAAAAAGGGGTTTTTTCTCAAATTAGCGCGATTTTAGCCCAAAATGATATTTCGCTCAACAATGTCTTAC AAAAAGAAATCCCGCATTCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAATCTATGTTAAACGCC CTTAAAGAGCTTGAAAATCTAAAAAGCGTGCTAGATACCCCCAAAATGATCCGTTTGGAACATTGA Protein sequence : MKKRLNIGLAGLGCVGSAVAKILQENQEIIKDRAGVEIVIKKAVVRDVKKRKGYPFEISNDLESLIEDEEIDIVVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQIAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHQDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAQNDISLNNVLQKEIPHSNKAKILFSTHTTNEKSMLNA LKELENLKSVLDTPKMIRLEH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 6e-59 | 42 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 6e-59 | 42 |
