Gene Information

Name : HPAKL117_03060 (HPAKL117_03060)
Accession : YP_007017160.1
Strain : Helicobacter pylori Aklavik117
Genome accession: NC_019560
Putative virulence/resistance : Virulence
Product : UTP--glucose-1-phosphate uridylyltransferase subunit GalU
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 640105 - 640926 bp
Length : 822 bp
Strand : +
Note : COG1210 UDP-glucose pyrophosphorylase

DNA sequence :
ATGATTAAAAAATGCCTTTTTCCTGCCGCTGGCTACGGCACGCGCTTTTTGCCGATCACTAAAACCATTCCTAAAGAAAT
GCTGCCCATTGTAGATAAGCCTTTAATCCAATACGCTGTAGAAGAAGCGATGGAGGCAGGCTGTGAAGTGATGGCGATCG
TTACAGGAAGAAACAAGCGCAGTTTAGAAGATTATTTTGACACGAGCTATGAAATAGAGCATCAAATCCAAGGCACCAAC
AAAGAAAACGCCCTAAAAAGCATTCGTAACATTATAGAAAAATGCTGTTTTTCCTATGTGCGCCAAAAACAAATGAAAGG
CCTAGGGCATGCGATTTTAACCGGAGAAGCCCTCATAGGCAATGAGCCTTTTGCGGTGATTTTAGCCGACGACTTATGCA
TAAGCCATGATCATCCAAGCGTGCTAAAGCAAATGATTTCATTGTATCAAAAATACCAATGCTCCATTGTAGCCATTGAA
GAAGTGGCGCTAGAAGAAGTTTCAAAATACGGCGTGATTAGGGGCGAATGGTTAGAAGAGGGGGTGTATGAGATTAAAGA
CATGGTGGAAAAACCAAGCCAAGAAGACGCTCCAAGCAATCTAGCCGTGATAGGGCGCTACATTCTAACCCCGGATATTT
TTGAAATTTTAAGCGAGACGAAACCGGGCAAAAACAATGAAATCCAAATCACAGACGCCTTACTCACTCAAGCCAAAAGA
AAACGGATCATCGCTTACCAATTCAAGGGCAAACGATACGATTGCGGGAGCGTGGAAGGCTATATTGAAGCGAGTAACGC
TTATTATAAAAAACGCTTATAA

Protein sequence :
MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN
KENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMISLYQKYQCSIVAIE
EVALEEVSKYGVIRGEWLEEGVYEIKDMVEKPSQEDAPSNLAVIGRYILTPDIFEILSETKPGKNNEIQITDALLTQAKR
KRIIAYQFKGKRYDCGSVEGYIEASNAYYKKRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 4e-48 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPAKL117_03060 YP_007017160.1 UTP--glucose-1-phosphate uridylyltransferase subunit GalU VFG0964 Protein 2e-55 48