Gene Information

Name : HPAKL117_02255 (HPAKL117_02255)
Accession : YP_007017003.1
Strain : Helicobacter pylori Aklavik117
Genome accession: NC_019560
Putative virulence/resistance : Virulence
Product : VirB11 type IV secretion ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 467193 - 468137 bp
Length : 945 bp
Strand : -
Note : COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis

DNA sequence : 
ATGGACTTAGACAAACTCAAAGATTATAGGGCTTTAAGAAACGCTATTTTAAGGCTCTTGCCTTATTTAGATAGCGGTAT
TACAGAGCTGATTATGAATAAAGAAAAAGAAATTTGGCTCTATAAGCTTGATGGAGTAAGAGAAAAAGTCTTTGATGAAA
ATTTAGACAAAGCTTTTCTACTTAGTTTTGGGGAGCAATTAGCGAGTTTTAGAGACTTGTTTTTTAATGCCAATTACCCC
ACCCTTAATACTTCCATTCCTACTTCTAGATATAGAGTGAGCATGAACCACTTTGCTATTAGTGCGGATAATGAATTGAG
TTTGAATATTAGAGTGCCAAGTGAGAAAAAGTTTGATTTAAAAGCTTTCAAGCTCTCTAGTGTGTGTCAATACGACTATG
AGTATTTACAAAACTTAATGATTGAGGGAAAGAACTTGCTTATTAGTGGAGGCACAGGCAGTGGAAAAACAAGCTTTTTA
AATGCTTTGATTGAATTTATCCCTAAACACACACGAATAGTGAGTGTAGAAGATAGCGAAGAATTAGATTTAATAGCGTT
TGAAAATCATAAATCCTTATTAGTGGATAAGACCGAAAGTTCTAAATTTACCTATGAAAACGCCTTGAATATGGCAATGA
GAATGAGTCCTGATAGGCTTATGGTAGGTGAGATTGACACACGAAATGCTATGCTTTTTTTAAGATTTGGCAATACAGGG
CATAAAGGCATGGTTTCTACTTTACATGCAGATAGCGTGCATGGGGTCATAGAGGCGATTGCTTTAAATCTACAGATGAA
TAAAAGTGGTTTAGATGTAAAAGTAGCTAGAAAATTCTTTGAAAGCAGTGTGGATATAGTTGTTCAAATTGTGCTTGATA
AAGCCACTAACACTAGATATATCCAAGAAATCTTACCCACCAAAGAATTAAGAAGTAGCCTATGA

Protein sequence : 
MDLDKLKDYRALRNAILRLLPYLDSGITELIMNKEKEIWLYKLDGVREKVFDENLDKAFLLSFGEQLASFRDLFFNANYP
TLNTSIPTSRYRVSMNHFAISADNELSLNIRVPSEKKFDLKAFKLSSVCQYDYEYLQNLMIEGKNLLISGGTGSGKTSFL
NALIEFIPKHTRIVSVEDSEELDLIAFENHKSLLVDKTESSKFTYENALNMAMRMSPDRLMVGEIDTRNAMLFLRFGNTG
HKGMVSTLHADSVHGVIEAIALNLQMNKSGLDVKVARKFFESSVDIVVQIVLDKATNTRYIQEILPTKELRSSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11-1 YP_002301094.1 VirB11 type IV secretion ATPase Virulence cag PAI Protein 9e-52 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPAKL117_02255 YP_007017003.1 VirB11 type IV secretion ATPase VFG1979 Protein 2e-42 42