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Name : HPAKL117_02245 (HPAKL117_02245) Accession : YP_007017001.1 Strain : Helicobacter pylori Aklavik117 Genome accession: NC_019560 Putative virulence/resistance : Virulence Product : VirD4 coupling protein Function : - COG functional category : - COG ID : - EC number : - Position : 464423 - 466681 bp Length : 2259 bp Strand : - Note : COG3505 Type IV secretory pathway, VirD4 components DNA sequence : ATGAAAATGCAATTTGTGAAAGCTTTTTGCGTGCTTTTTAGCATTTTACTTATCCCCTTATTTTTTATCTTGGCAAATTA CTACACTTTTGATGCCTTAAAATCATTTAGACAAGCTTATTTTTTCTCTCAAAGCGTGTTTGTAGGGCTTTATAAGGGAG CGAGTATCTTAGATTTAAAATTTGAAGTCTATATCACTATGATAATGTCTTTAATGCCCTTAGTAGCTACGATTTATATG AGTATTCAAAAGACTAAAGAAACTTCGCATGGCTATGCGAGATGGGCTAATAGCAAAGATATAGAATGTTTTAAAATTTT TAGTAAAGAGGGCTTTTGTAAGGTAGTCCATAGATTAGGGGTGCAATTTGATAATGGCTTTATTCTAGGAAAATTTGGTT TTCCAAAACTTAGAGATGTGTGTTATGACAAGCCTTTAGGAGCCATGATTGTTGCACCACCCGGAGCTGGTAAAACCGCA TGCGTGGCTTTACCAAATCTATTGACCTTGCCTAATAGCTGTATTATCACCGATATTAAAGGCGAATTAAGAGATAAGAC TGCAGGCTATAGACAAAAATTCTTAAACAATAGGATTTTAATCTTTAATCCTTATGGTGATGATAACACTTGCTATTTTA ATCCTTTTGATAAAAGGATTGTAAAACCCATGAACTTTGACCAACGCCTAAGGCTTGTTCAAGAAAATGCCAATAATGTC TTTATTAGCGAAGAAAAAGGCGAAGACCATTGGGTATCTAAAGCTAAAGATTTGTTTAGTTTTTATGCCTTGTATGATGT TTGTTCCAAAGATGAAACAAACTTTTTTGATGTCGCTATGGGTCCAAATAGAGATTATGTTAATTTGATTGACAAAAGAA GCCGTTATTACAAACAACTCTATCAACACGATAAAAAAACAGGCGAAATTATCCTAGACCCACAAACTAATGAGCCTATT TTAATCCCTAATGTGAATGCGAGAAAATTATGGTATTTGCAAGTTTCAGAGCAAAAATACGTCGACCCCAAAGACCCTAG AAATTTTGACACCAATGAGCCTGAACCAGCCCCTAGAAGTGAAGGGGCATTAGATGAAATTGTAAGAAATGATGCAAGAG CTTGGGCTAATAGTGCTGAAGAAGAATTTGCAAGTATCATTTCTACCTTTAATCGCTTTGTGTCTGTTTTTAAGAGCAAT CAAGTAAGAATTGCTACTTCTAAAATGAGCTTTGATTATGAAGAATTAAGAACGGACAATATTAGTCTTTATATTGTTAT TGCTCAAAAAGATATTAACACGCTTGCTCCCTTAGTTAGAGTGATTTTAGAAAGCATTGCTAAAAACTTATTAACTAATG AAAGCTCTAAAAAAGAAGAACGCATTTATATGATTTTAGATGAATTTGTTAGATTTGGTAAGTTGCCTTTCTTATTAGAA ATGCCAGCATTGTGTCGTTCTTATAATGTTGTCCCCTTATTCATCACACAAGATTATGCGATGATTAGAAAATATTATAG CGATGATGATTTGAAAATCTTAAAAGGCGTGGTGCATTATAACATTGTCTTTAAGATGAATAGCGCTGAAGATGCTGAGA TTGTCTCTAAGGAAGTGGGCGAATTTACCAGACAATCTAAAAACTATTCTACTGAAAAGGGTCAGCTAGTCTTTGGAGGT AGTTCTTCTTATAGCCATGAGGGTAGAAACTTACTCACAGCCCAAGACATTATGAATATAGAATCAGATGAAGTCATTGT AATTGTTACAGGGGCTAAAGCGACCCCTTTAAAACTTAAGGCTAATTATTGGTTCAAAGATAAAGAGCTTTTAAAAAGAG CTAATTTGCCTATTGATTTAGAAGTAGAAAGAAGAAGAGTTGAAGAGCCTACGCAACCCACTACAGAAATTACAACGCCC CCTAATCAAAACAAAGCTAACTTAGATCAAAGCAATAAGGGGGAAAACACAGAAAATAAGGATAATGAGAGCAAGACCAA CGAGAATAATCCCACTATACCACAAAAAGAGAGTGAAAATTCAAATCTAACAGAAAGCGAGAAAGACCATGAAAACCCCA CTACTTCACAAGAAAAAAGCAAGAATGAAAACACGGAGCAAGAAAATGATGAGACTGATGAGATTTTAAAAAAGCCACTC AATGAAATGAACACAGAAGAAAAAAGAGCCTTGTTTAAGAAAATGCAACAAGGCGATGAAGAAAGCGAACAAGAAGTTCT ACAAGACACCCAAAGTTAA Protein sequence : MKMQFVKAFCVLFSILLIPLFFILANYYTFDALKSFRQAYFFSQSVFVGLYKGASILDLKFEVYITMIMSLMPLVATIYM SIQKTKETSHGYARWANSKDIECFKIFSKEGFCKVVHRLGVQFDNGFILGKFGFPKLRDVCYDKPLGAMIVAPPGAGKTA CVALPNLLTLPNSCIITDIKGELRDKTAGYRQKFLNNRILIFNPYGDDNTCYFNPFDKRIVKPMNFDQRLRLVQENANNV FISEEKGEDHWVSKAKDLFSFYALYDVCSKDETNFFDVAMGPNRDYVNLIDKRSRYYKQLYQHDKKTGEIILDPQTNEPI LIPNVNARKLWYLQVSEQKYVDPKDPRNFDTNEPEPAPRSEGALDEIVRNDARAWANSAEEEFASIISTFNRFVSVFKSN QVRIATSKMSFDYEELRTDNISLYIVIAQKDINTLAPLVRVILESIAKNLLTNESSKKEERIYMILDEFVRFGKLPFLLE MPALCRSYNVVPLFITQDYAMIRKYYSDDDLKILKGVVHYNIVFKMNSAEDAEIVSKEVGEFTRQSKNYSTEKGQLVFGG SSSYSHEGRNLLTAQDIMNIESDEVIVIVTGAKATPLKLKANYWFKDKELLKRANLPIDLEVERRRVEEPTQPTTEITTP PNQNKANLDQSNKGENTENKDNESKTNENNPTIPQKESENSNLTESEKDHENPTTSQEKSKNENTEQENDETDEILKKPL NEMNTEEKRALFKKMQQGDEESEQEVLQDTQS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virD4-1 | YP_002301090.1 | VirD4 coupling protein | Virulence | cag PAI | Protein | 1e-132 | 53 |
