|
Name : hemC (HPAKL117_01190) Accession : YP_007016790.1 Strain : Helicobacter pylori Aklavik117 Genome accession: NC_019560 Putative virulence/resistance : Unknown Product : porphobilinogen deaminase Function : - COG functional category : - COG ID : - EC number : 2.5.1.61 Position : 239685 - 240605 bp Length : 921 bp Strand : - Note : COG0181 Porphobilinogen deaminase DNA sequence : GTGGGAAATTTGGTGATTGGCTCTAGGGGGAGCGAATTAGCCTTATGGCAAGCGAATCACATTAAAGAACGCCTGAAAAA AGAATGCTCTATAGAAAGCGAGATTCAAATCGTTAAGACTAAGGGCGATAAAATCTTAGACACCCCTTTAAATAAGATTG GAGGTAAGGGGCTATTCACTAAGGAATTAGAAGAATTGCTTTTAAAAGGCGAAATTGATTTGGCGGTGCATTCTTTAAAA GATGTGCCGGTCGTGTTTGAAAAGGGGTTAGACTTGGCATGCATCACTAAAAGGGCTGATGTGAGGGACACTTTTTTAAG CGTGAAATTCCCTGATTTGATGAGCTTGCCTAAAGGGGCAAAGGTTGGCACGACTTCTTTAAGACGCTCCATGCAACTCA AACTAAAACGCCAGGATTTGGACACAGAAAGCTTAAGGGGGAATGTCCAAACCCGTTTGAAAAAGCTTGAATGCGGAGAA TTTGACGCTATCATTTTAGCTGAAGCCGGGTTGTGCCGCCTAGAAATTCAAGGAGCGAAATACCGCAAGGCTTTTAGCGT GGAAGAAATGATTCCTAGCATGGGTCAGGGGGCTTTAGGGGTGGAAATGCTCAAAAGCCACAAGCATTTTGCCACGCTTC AAAAACTCAACGATGAAGAAAGCGCGTTTTGCTGCCATTTGGAAAGGGAGTTTGTTAAGGGGCTTAATGGGGGGTGTCAG ATCCCTATTGGCGTGCATGCGAGTTTAATGGGTGATAGGGTTAAAATCCAGGCGGTTTTAGGCTTGCCTAACGGGAAAGA AGTCATCGCTAAAGAAAAGCAAGGGGATAAAACTAAGGCGTTTGATTTGGTTCAAGAGCTTTTAGAAGCGTTTTTGCAAA GTGGGGCTAAAGAGATTTTAGAAAAGGCGCAGTTGTTTTAA Protein sequence : MGNLVIGSRGSELALWQANHIKERLKKECSIESEIQIVKTKGDKILDTPLNKIGGKGLFTKELEELLLKGEIDLAVHSLK DVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGE FDAIILAEAGLCRLEIQGAKYRKAFSVEEMIPSMGQGALGVEMLKSHKHFATLQKLNDEESAFCCHLEREFVKGLNGGCQ IPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEAFLQSGAKEILEKAQLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00327 | YP_008207792.1 | Porphobilinogen deaminase | Not tested | AbaR25 | Protein | 8e-44 | 46 |
| BJAB0868_00331 | YP_008211657.1 | Porphobilinogen deaminase | Not tested | AbaR26 | Protein | 8e-44 | 46 |
