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Name : HPAKL117_07520 (HPAKL117_07520) Accession : YP_007018020.1 Strain : Helicobacter pylori Aklavik117 Genome accession: NC_019560 Putative virulence/resistance : Unknown Product : integrase-recombinase protein Function : - COG functional category : - COG ID : - EC number : - Position : 1557541 - 1558617 bp Length : 1077 bp Strand : - Note : COG0582 Integrase DNA sequence : ATGAAAAAATCAAATGACAATAACGCACTCGCCAGAAGTCAAAGGGAGTTGTTTGTAGGGATTAGGGATTTTATTGTTTT TAAATTTAAGCGTATGGTTGTTTTTAACGGAGTAAGGGATTTTACAAAAATGAGATTTTTGTCCATAGAATTAGAAAAAT GCGAAAATATTAAAGATTTGGAAAAACTATGTCATATAATTTATAATCAAGGCACAAAGCATATTTTGATGATGCGTGTA TTGTTTTTATTCTTTGACTATTTCTGCAAGCATTTGAAAGTTAAGCGATTGAGACTACTCAATGAAGAAATGCTTGTGAA TTTTTTATTTGAGTTAGCTAAACAAAGAAAGATTAATTCAATGGCAAAATATGTAATGTATATTAGGCAATTTTTTGATT ACTTGGATAGGACTAAACATTATGAATTTTATTTTAGTCTTAAAAATATAGCCTTTGCTAAACACAAGGATAATTTGCCT AAACATCTAAATTCAAAAGATTTAAAATCTTTTATATATACTCTTATAAACTATAGAACTAGAAGCAGTTATGAAAAGAG AAATAAGTGTATTTTGCTCTTAATTATTTTGGGTGGTTTGAGAAAATCTGAGGTTTTTAATTTAGAATTGAGAAATATTG TTTTAGAAAAAGAGCATTATATCTTGCTTATAAAAGGCAAAAACAATAAAGAGCGAAAAGCGTTCATTAAACGAGAAATG CTAGAAAAATCTTTAGATGAGTGGTTGGGTGATAGCAAACGATTGAGTAGTTTTAATGGGCATTTTGTATTTAAGAAGTC TTTGTCTAACTATACTCAAAAGCATTGTTCAATCAGTAATTTTGTGTTAAAGATTTTTATGTTGAGTGGTATTGAAAATT TTAAACAATATGGCACAGGATTGCACCTATTTAGGCATAGTTTTGCCACTTTAGTCTATGCTAAGAGTAGGGATATTGTT TTGACTTCAAGAGCATTGGGGCATCAGTCCTTAAGCTCCACAAAAATCTACATTCACACCGCACAAGAATACAATAAACA AGTAGCAAGCATTTTTGATAATTTGTTGAGTGGGTGA Protein sequence : MKKSNDNNALARSQRELFVGIRDFIVFKFKRMVVFNGVRDFTKMRFLSIELEKCENIKDLEKLCHIIYNQGTKHILMMRV LFLFFDYFCKHLKVKRLRLLNEEMLVNFLFELAKQRKINSMAKYVMYIRQFFDYLDRTKHYEFYFSLKNIAFAKHKDNLP KHLNSKDLKSFIYTLINYRTRSSYEKRNKCILLLIILGGLRKSEVFNLELRNIVLEKEHYILLIKGKNNKERKAFIKREM LEKSLDEWLGDSKRLSSFNGHFVFKKSLSNYTQKHCSISNFVLKIFMLSGIENFKQYGTGLHLFRHSFATLVYAKSRDIV LTSRALGHQSLSSTKIYIHTAQEYNKQVASIFDNLLSG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 1e-87 | 56 |
