Gene Information

Name : HPAKL117_06690 (HPAKL117_06690)
Accession : YP_007017858.1
Strain : Helicobacter pylori Aklavik117
Genome accession: NC_019560
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1378981 - 1379967 bp
Length : 987 bp
Strand : -
Note : COG3736 Type IV secretory pathway, component VirB8

DNA sequence :
ATGGAAAAAGTTTGCATGAACGCATGGGAGTTGCCTAAGGTTTTAGAAGAAAGATTAAAAGAAAAATATGGCGATGATTG
GGAAAAATATGTTAAGGCTAAAGCAATAAACGAAGAACAGCTTGAAGAACAAGTTAAAGATAAAGCCAAAGAGCAACAAA
AGATACAAAGAGAAAAAACACTCAGTGGATTTTTAAAAAAAGTTGGTCTAAAAAAGCGTGATATGTTACAAAGCACTATG
CTGTTTGATGGAGTCAAAGAAGCTGATGCGCTTTTTCAAGCAGAGCGTAAAATTGGCGATTGGATCTTTAGCAGTGCAGT
ATTCTTTTTTGCTTTAGCTCTTATAGAAGCCATTATTATTATATGCTTATTGCCCTTAAAAGAAAAAGTGCCTTATTTGG
TAACCTTTTCAAACGCTACACAAAATTTTGCCATAGTCCAAAGAGCAGACAAGAGTATTCGTGCCAATCAAGCGCTTATA
AGACAATTGGTAGCATCTTATGTCAATAATAGAGAAAATATTTCAAATATAAAAGAGCAAAACGAAATAGCCCACGAAAC
CATTAGATTGCAAAGTGCATTTGAAGTATGGGATTTTTTTGAAAAACTTGTTTCTTATGAGCATAGCATTTACACTAATA
TCAATTTAACACGAAAAATTAGCATTATCAATATCGCTTTAATTAGTAAAACCCAAGCCAATATTGAAATATCCGCACAA
CTTTTTAATAAAGAAAAGTTAGAAAGCGAAAAGCGTTATAGAATAATTATGACCTTTGAATTTGAACCCATTGAAATTGA
TACAAAATCTGTTCCCTTAAATCCTACAGGCTTTATTGTTACAGGTTATGATGTAACTGAAATTGCGATTTTAAAAGACC
TAGATGAAAAAAATAAAGTCAAAGATGATGGTGTGAAATCTAGGATTATCCATACCGAGAAAAAAGACCCTCATATGAGC
CAATATAAAGATGTTAAGGAACAATAA

Protein sequence :
MEKVCMNAWELPKVLEERLKEKYGDDWEKYVKAKAINEEQLEEQVKDKAKEQQKIQREKTLSGFLKKVGLKKRDMLQSTM
LFDGVKEADALFQAERKIGDWIFSSAVFFFALALIEAIIIICLLPLKEKVPYLVTFSNATQNFAIVQRADKSIRANQALI
RQLVASYVNNRENISNIKEQNEIAHETIRLQSAFEVWDFFEKLVSYEHSIYTNINLTRKISIINIALISKTQANIEISAQ
LFNKEKLESEKRYRIIMTFEFEPIEIDTKSVPLNPTGFIVTGYDVTEIAILKDLDEKNKVKDDGVKSRIIHTEKKDPHMS
QYKDVKEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB8-1 YP_002301100.1 VirB8 type IV secretion protein Virulence cag PAI Protein 6e-62 55