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Name : HPAKL117_06685 (HPAKL117_06685) Accession : YP_007017857.1 Strain : Helicobacter pylori Aklavik117 Genome accession: NC_019560 Putative virulence/resistance : Virulence Product : VirB9 type IV secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 1377440 - 1378981 bp Length : 1542 bp Strand : - Note : COG3504 Type IV secretory pathway, VirB9 components DNA sequence : ATGAAAAAATTCACTCTATCGCTATTTTTGTATTGCGCTTTACTTAGTGCTGAAGAGGATATTTTTAGAAACAATACAAA TGAAACTGATCCTACAAGTTCTTTTGAGCATGGCAAAGAAAACAACAATCTTATCCCAGCAAAATCTGATAGTTTAGAAA GTTTCAAAGAACAAGAAAACAAAGAAAAAGCCAAACAGCTTATGGATTTAAAAGCCTTACAGAGCGTGTATTTTTCTAAA AATAGAAAATTGCAAGACAATAATTTCAATGTCTTATATGTGGCAGGCAACACCAACAAAATCCGCTTACGCTATGCGAT GACTACCACTTTTATTTTTGATAATGATCCTATTATCTATGTGAGTTTAGGAGATCCTAGCGGATTTGAGCTCACTTACC CCACTAATGATCATTACGACTTGTCCAACATGCTAGTGATCAAACCCTTGCTTATAGGGGTGGATACAAACCTAACCGTA GTCGGAGCGAGCGGAACAATTTATACTTTTTACTTGTTTAGCACCACTTACACTAGCAAATTTCAAAGCTATTTTTCAGT GTTTGTCTCTAATAAAAGGGCTATCGGTAAGCTCAATATTTTGTCTAAAAACGAGCTAGAAAAAAGAGAGCAAGAACAAT GGGCTAAAACAGAAACAAATACAAATAGCTCCAATAAACAAGACAAACAAAAGCTTGACTACAGAAAAATTAATTATGAG AGCAAGGAAATTGATGATGGCAAGTTTATAAGAATTGGAGATGAAGTCAATCACATTTTCATTGAAAAAGCTAAAATCAA TCGTGGTTATTTGCAAAAACCCAAACACAAACGCACCTGGTGGAGTTTGTGGCTCTATAAAAAACCCAGTGATGATGCGC TTGATATAAAGGCACTAGATGTCTTTGATGATGGCAAATACACTTATTTTAGATATGACAGAGATCAAGCCTTTTCAAAA TTTCCTTACACCTATAAGGTTGTAGATGGGTATGATAATCCTATCAATAGCCGTGTGGTAGGGAATTACATTATTGCTGA AGATGTTTCTAAAAAATGGACTTTAAGGAGCGGTAAGGAATATGTGTGCGTAAGAAGAGATAAGCACAAATACCAAAAAT CTAAGGACTTCATGCGTTTAAAAAGGCTTTTAGAGCAAGATGAAGCCATGAAAGCCAAACGAAACAACATTCACTTGATT GAAGACACTACGCCTCAACCTAAAAATGCCATTAGCGTAACGGAGTTGTTAGCTCAAATCAAAAACCAAACTCCAAATGA AAAATGCCGAGCCTTAAATGAAGAAGAAGTTAAGACTTTAGAAGAGGTTAAAAACATCATAAAAGCTCCCAAGCATTTGC AAAAAGATTTGAAAAACAAGCTCAAAAAACACACAATCAAAACCCATTATTGTGTTCCTATCCCCTATATAGAAAGACCA AAAACCACTGATGGTTTAGAGAAAAGTAAAAAGGGGATGAATAACACCCAAAAACAAAATCAAGCGAACCCTATTAAAGA GATTAAAGAAAACAAGAAATGA Protein sequence : MKKFTLSLFLYCALLSAEEDIFRNNTNETDPTSSFEHGKENNNLIPAKSDSLESFKEQENKEKAKQLMDLKALQSVYFSK NRKLQDNNFNVLYVAGNTNKIRLRYAMTTTFIFDNDPIIYVSLGDPSGFELTYPTNDHYDLSNMLVIKPLLIGVDTNLTV VGASGTIYTFYLFSTTYTSKFQSYFSVFVSNKRAIGKLNILSKNELEKREQEQWAKTETNTNSSNKQDKQKLDYRKINYE SKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQKPKHKRTWWSLWLYKKPSDDALDIKALDVFDDGKYTYFRYDRDQAFSK FPYTYKVVDGYDNPINSRVVGNYIIAEDVSKKWTLRSGKEYVCVRRDKHKYQKSKDFMRLKRLLEQDEAMKAKRNNIHLI EDTTPQPKNAISVTELLAQIKNQTPNEKCRALNEEEVKTLEEVKNIIKAPKHLQKDLKNKLKKHTIKTHYCVPIPYIERP KTTDGLEKSKKGMNNTQKQNQANPIKEIKENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB9-1 | YP_002301099.1 | VirB9 type IV secretion protein | Virulence | cag PAI | Protein | 0.0 | 99 |
