|
Name : HPAKL117_06680 (HPAKL117_06680) Accession : YP_007017856.1 Strain : Helicobacter pylori Aklavik117 Genome accession: NC_019560 Putative virulence/resistance : Virulence Product : competence protein Function : - COG functional category : - COG ID : - EC number : - Position : 1376208 - 1377443 bp Length : 1236 bp Strand : - Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGAAAAAACTTCTTTTACTTTTAGAGCATAAAATCATAAAAATTGGCTTAATTATTGTGATTGTATTAGCTGGTTTTTT TCTTTTTTACGAACAAGAAATCAAAGAAAAAGCTGTTAATGTTTCTCAAGGTAAATTCCCTACTTCATCTTATTTGTTTC AAGCTTACGAAGGCATTAAGAATAAAATAGATACTATCAATGAAGTGAAACCAAACGATGAAACTAAAAGCGTTAATGAG AATATAGAAAAAACACAAAAAGATTTAGATGATTTTAATGTGCTAGTGCAAAAATTACCAAATTTGCCTAAGGATTTTAA TAAAACGCTTATTAAACCACAAAGTCCATCCTTCAACTACAATACCGCTAACGAAGAAGAAAAAACCCGCCTTGTGATTT TAGCGTCTCGTATTAGCAGTCAAAAAGAAACACAGCCTCCAATCTCTATAAAAAATAGTGTTTCTAATACAAAATCCAAA GAAAAACAAGAACTTGAAAAAGAATACGGCTCTAACGGTTTTAAAAATTTTAAAAGAAAAAATGTAGCGAGCAGTGAAAA CAAACTTTTGAGAACGATTACAGCTGACAGAATGATCCCAGCCATTCTGATCACTCCTATTAGTAGTGAAATAGGGGGGA GTAAGATAGTCGCTCAAGTGGAGAGTGATATATACGCAACGATGGGTAGAGCGGTTTTAATCCCTAAAGGGAGTAGAGCC ATAGGTTATTACAACTCTAATAACAAAATAGGAGAATACCGCTTAGAAATTGCTTGGAATAGGATAATCACGCCACAAGG GGTCAATATCATACTAAGCGATGCTAAGGGGGCTGATGTCAAGGGCTATAACGGCATGATAGGCACACTCCATAACAAAT ATTGGGAACGCTATGGCATTCCTTTATCCTTAAGCACCTTGTCAAATGGGCTACTCATAGGTCTTACTAGCGGTCTTACC GAAGCGATGAAAAACAAAAAGGGTGGTTTTAACCAAAACTATTTTGGAGATTACATGATGATGCAAATGACGAGGCAAAC TGGTATCAGCCTAAATAATATTATCGCTCAAATCATGCGAGAGCAAATCAGGATTAAGCCCATTATCACTATTAGAGAAG GAAGCCATATTTTTATTAGTCCTAATACGGATATTTGGTTTCCTATCCCTAAAAACAATGAAGTCTTAGCGAAATTTTTT AATGAAGAAAAGGAGCAAAACAATGATACAAAATAG Protein sequence : MKKLLLLLEHKIIKIGLIIVIVLAGFFLFYEQEIKEKAVNVSQGKFPTSSYLFQAYEGIKNKIDTINEVKPNDETKSVNE NIEKTQKDLDDFNVLVQKLPNLPKDFNKTLIKPQSPSFNYNTANEEEKTRLVILASRISSQKETQPPISIKNSVSNTKSK EKQELEKEYGSNGFKNFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGRAVLIPKGSRA IGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNGLLIGLTSGLT EAMKNKKGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFF NEEKEQNNDTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB10-1 | YP_002301098.1 | VirB10 type IV secretion protein | Virulence | cag PAI | Protein | 3e-140 | 81 |
