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Name : gabD (BN389_09440) Accession : YP_007014509.1 Strain : Listeria monocytogenes LL195 Genome accession: NC_019556 Putative virulence/resistance : Unknown Product : Succinate-semialdehyde dehydrogenase [NADP(+)] GabD Function : - COG functional category : - COG ID : - EC number : 1.2.1.79 Position : 949436 - 950902 bp Length : 1467 bp Strand : + Note : - DNA sequence : TTGAGTATTAAAGAAACAGCCTTACCAAAAGTTCAAACAAAATTATTTATTAATGGAAAATGGACGGATGGAGATAATAA AGAAACAAAAGATATTGTAAACCCAGCAAATGGAGAAGTTATTGCCAAAATCGCTCAAGCTGGACCAAACGAAACCAAAA AAGCCATTAAAGCTGCAAAAGAAGCATTTCCTGATTGGGCAAAAATGGAACTAGCTGATCGCGTCAAATTATTACACAAA ATTGCCGATTTAATGGAAGAAAAAGCAGATACACTAGCAAAAATTATGACGCTTGAACAAGGTAAACCGCTAAAAGAATC AAAAGGAGAAGTCCTAACTGGCGCAGAAAACTTCCGATTCGCTGCAGAAGAAGCAAGAAGATTATATGGGGAAACTATCC CAGCGCCAAACAATCACGCGTTTATCGTCAAAAAACAACCAATTGGTGTAGTTGCGGCCATTACTCCGTGGAATTTCCCA GGTGGTATGGTGACACGAAAACTTGCTCCAGCGCTTGCAACCGGAAATACAATCGTATTAAAACCTTCCGGAGATACGCC GCTTTCGGCCCTAGCTATCTTTGAAATTTTTGAAGAAGCCGGCTTGCCAAAAGGTGTTGCCAATATCGTTATGGGTAGCT CCAAAGAAATCGGTGAAACATTAACTGACAGTGATGATGTTCGTAAACTAACTTTCACCGGCTCCACGAAAGTCGGTCAA ACACTATTCAAACAATCAGCCGAAACACTGAAAAAAATCTCGCTCGAACTTGGTGGACATGCGCCATTTATCGTATTTGA TGATGCAAACCTGGATGCTGCTGTAAATGATTTAGTTGCCGCAAAATTCCGCAATAACGGTCAAGTATGTGTATCGCCAA ACCGAATTTTTGTTGCCAAAGAAATTAAAGAAAAATTCACTAAGGCGCTAGTTGCTAAAGTAGAACAACTAAAAGTAGGT AACGGTTTAGATGATGTGAATGTTGGTCCACTTATCCGCGAAGATGCGATTGACAAAATCGACAAACAACTTAAAAATGC CACAGATAAAGGTGCCAAAGTCCTAACTGGCGGCGGTCGTTTAACAGGTTCCGACTATGACAAAGGCAACTTCTACAAAC CAACTGTCTTAGATAACGTTACCCGTGAAATGGACATTTTTTATGAGGAAACATTTGGTCCAGTAATCCCGCTTATCACA TTTGAAACGGAAGACGAAGCAATCGAAATGGCGAATGACAGTGAATTCGGTCTTGCTTCTTACTTCTACACTAAAGATTT AGCACGCGTAGAAAAAGTGGGAGCAGCACTAGAATACGGAATGGTCGGAGCAAATGAAATTGCCATCTCTAATCCGGAAA CTCCATTTGGCGGCGTTAAACATTCTGGTTTCGGTCGCGAAAATGGCCACTACGGAATGGAAGAATACATCCAAGTGAAA TTCATTAACTTAAAATATCGTGACTAA Protein sequence : MSIKETALPKVQTKLFINGKWTDGDNKETKDIVNPANGEVIAKIAQAGPNETKKAIKAAKEAFPDWAKMELADRVKLLHK IADLMEEKADTLAKIMTLEQGKPLKESKGEVLTGAENFRFAAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFP GGMVTRKLAPALATGNTIVLKPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIGETLTDSDDVRKLTFTGSTKVGQ TLFKQSAETLKKISLELGGHAPFIVFDDANLDAAVNDLVAAKFRNNGQVCVSPNRIFVAKEIKEKFTKALVAKVEQLKVG NGLDDVNVGPLIREDAIDKIDKQLKNATDKGAKVLTGGGRLTGSDYDKGNFYKPTVLDNVTREMDIFYEETFGPVIPLIT FETEDEAIEMANDSEFGLASYFYTKDLARVEKVGAALEYGMVGANEIAISNPETPFGGVKHSGFGRENGHYGMEEYIQVK FINLKYRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-100 | 52 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 7e-75 | 41 |
