Gene Information

Name : cbh (BN389_20960)
Accession : YP_007015661.1
Strain : Listeria monocytogenes LL195
Genome accession: NC_019556
Putative virulence/resistance : Virulence
Product : Choloylglycine hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.24
Position : 2134596 - 2135750 bp
Length : 1155 bp
Strand : -
Note : -

DNA sequence :
ATTTTCAAGAAGTTAATAGAGGAGTATACTTTAAAAAATTTTTATCAGAGCCAAATCATCTTGTATGAGGTAATAAATTG
GCCATTTTTTGTGAAAAAAACCACAAATTATGTTTTACACAAAAGTCCGAGGGTACTGGTATACATGTATGGTGAAAAAT
TTGAGGAGGGATTTTTAATGTGTACGTCAATAACTTATACAACGAAGGATCACTATTTTGGAAGGAATTTCGATTATGAA
CTTTCTTACAAAGAAGTTGTGGTTGTTACGCCGAAAAATTACCCGTTCCATTTTCGCAAGGTAGAGGATATAGAGAAGCA
TTATGCACTTATTGGTATTGCTGCTGTGATGGAAAACTACCCGTTGTATTACGATGCTACCAATGAAAAAGGCCTTAGTA
TGGCAGGACTCAATTTCTCAGGAAATGCGGATTACAAGGATTTTGCAGAAGGTAAGGACAATGTAACGCCATTTGAATTT
ATTCCGTGGATTCTTGGTCAATGCGCTACTGTAAAAGAAGCAAGAAGATTACTTCAGAGAATCAATCTCGTGAATATTAG
CTTTAGTGAAAATTTGCCGCTATCTCCTTTACATTGGTTGATGGCTGATCAAAACGAATCTATTGTAGTGGAATGTGTGA
AAGATGGACTTCACATTTATGATAATCCTGTTGGCGTGTTAACAAATAATCCAACATTTGATTACCAACTATTTAATTTA
AACAATTATCGCGTTCTTTCGAGTGAAACTCCAGAAAATAATTTTTCCAACGAGATTGATTTGGATGCTTATAGTCGTGG
GATGGGCGGAATCGGCTTACCTGGCGATTTATCTTCTATGTCTCGTTTTGTGAAAGCAACTTTTACCAAATTGAATTCTG
TTTCAGGTGATTCTGAATCAGAGAGCATTAGCCAATTTTTCCATATTTTAGGCTCGGTGGAACAACAAAAAGGTCTGTGT
GATGTTGGTGGGGGAAAATACGAGCATACCATTTATTCCTCATGTTGCAATATCGATAAAGGAATTTATTATTATAGAAC
ATATGGAAACAGTCAAATTACTGGTGTGGATATGCACCAAGAGGATTTAGAGAGCAAAGAACTAGCTATTTATCCACTCG
TTAATGAGCAACAACTAAACATTGTTAATAAATAA

Protein sequence :
MFKKLIEEYTLKNFYQSQIILYEVINWPFFVKKTTNYVLHKSPRVLVYMYGEKFEEGFLMCTSITYTTKDHYFGRNFDYE
LSYKEVVVVTPKNYPFHFRKVEDIEKHYALIGIAAVMENYPLYYDATNEKGLSMAGLNFSGNADYKDFAEGKDNVTPFEF
IPWILGQCATVKEARRLLQRINLVNISFSENLPLSPLHWLMADQNESIVVECVKDGLHIYDNPVGVLTNNPTFDYQLFNL
NNYRVLSSETPENNFSNEIDLDAYSRGMGGIGLPGDLSSMSRFVKATFTKLNSVSGDSESESISQFFHILGSVEQQKGLC
DVGGGKYEHTIYSSCCNIDKGIYYYRTYGNSQITGVDMHQEDLESKELAIYPLVNEQQLNIVNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 3e-114 75
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 4e-114 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbh YP_007015661.1 Choloylglycine hydrolase VFG2162 Protein 2e-144 99