Gene Information

Name : clpB (FTS_0084)
Accession : YP_007011201.1
Strain : Francisella tularensis FSC200
Genome accession: NC_019551
Putative virulence/resistance : Virulence
Product : chaperone clpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 89338 - 91917 bp
Length : 2580 bp
Strand : -
Note : -

DNA sequence :
ATGGATATAAATAAATTTACAATAAAACTACAAGAAGCTCTAGCTGAGGCTCAATCTTATGCTTTTCAACAAAAAGCAAC
TGAGTTTACATCAGCACATATACTAAAAGCTCTTTTGGAGCAAAATGATAGTGTTGCTATATCTATATTAAGCGTTTGTG
GTGTTAATATACAAAACTTTATAAAAGCTGTAAATGATATGGTTGATAGTGTTGCGGTATTATCTGGAGAAGGTAACCCT
CAAGTAACACCATCTAGAGATTTAATAGCTACATTACATAAAATGCAAGGGCTTGCTAATAAAAATGATGATGAGTTTAT
CTCGAGTGAGGTTTTCTTATTAGCCTCTTTAGAAGATAAAAGTTTAACTGGACTGTATAACAAATTCGGTATTACAAAAG
AAAAATTAACAAAAGCAGTCAATGATTATCGCGGAGGGGAGAAAGTGAGTAGTCAAAATCAAGAAGATATGAAAGGTGCA
TTAGATAAATACACGGTAGATCTAACTGATCTAGCGAGAAAAGGAAAAATTGATCCAATAATCGGTAGAGATAGTGAGAT
CCGTAGAACTATTCAAGTATTACAAAGAAGAACTAAGAACAACCCTGTGCTTATAGGTGAGCCTGGTGTTGGTAAAACTG
CTATTGTTGAGGGCTTAGCTCAACGAATAGTTAATGATGAAGTACCAGAAGGTGTCAAAGGTAAAAAAGTACTATCATTA
GATATGGGTGCACTGCTAGCTGGTGCTAAATTTAGAGGAGATTTTGAAGAGCGTCTAAAATCTGTATTAAAAGAGCTATC
AAAACAAGAAGGTAATGTAATTCTCTTTATAGATGAATTACATACTATGGTAGGTGCTGGTAAAGCAGAAGGATCTATGG
ATGCTGGTAACATGCTTAAACCTGCTCTAGCTAGAGGAGAGCTAAAGTGTGTTGGTGCAACAACTTTAGATGAGTATCGT
GAGTATGTTGAAAAAGATCCGGCACTTGAGCGAAGATTCCAGAAAGTGCTAGTTGATGAACCTACTGTAGAAGATACTAT
CGCTATACTTAGAGGCCTAAAAGAAAGATATGAGCTACATCATGGTGTAAATATCACAGATTCAGCTATTGTAAGTGCAG
CAACTTTGTCACATAGGTATATCACAGATAGACAGCTACCTGATAAAGCTATAGATCTAGTAGATGAAGCAGCAAGCCAA
ATTCGTATGGAAATAGACTCTAAACCTGAAAAAATGGAAAGCTTATATCGTAGAATCATCCAGCTGAAAATGCAACGCGA
ACAGCTAAAGAAAGAGAAAGATGATGCTACTAAAAAACGTTTAGAGATACTTGAGCAAGAAATAAAAGGGCTAGACTCCG
AGTATAAAGGACTAGAAGAGCTTTGGAAAGCTGAAAAACTTAAGATGCAAGGTACAAGTAAACTAAAAGAAGAGCTTGAG
AAAGCCAAGTTTGAACTTGAAAAGTACCAAAGAGTGGGTGATTTGAGCAAAATGGCAGAATTACAATACGGTAAAATACC
TGAGCTAGAAGCACAAATTAAACAAATAGAAGAAACTGAAGCAGAACCTTCTGAAAACAAATTAGTAAGAACATCTGTTA
CAGAAAATGAGATTGCTGATGTAGTTTCAAAAGCTACTGGAATACCTGTGTCTAAGATGATGGAAGGCGAAAAAGACAAG
CTTCTAAATATGGAAAGTTTCTTACATAAAAGAGTAATCGGACAAGATCAAGCTATAAAAGCAGTATCAAATGCTGTAAG
AAGATCTCGTTCTGGATTATCAGATCCAAATAGACCTATAGGCTCATTCATGTTCTTAGGTCCAACTGGTGTCGGTAAAA
CTGAGCTTACAAAAGCTTTAGCAGAGTTTTTGTTTGATGATGAAGATGCCATGCTTAGAGTAGATATGTCTGAGTTTATG
GAGAAACATTCTGTAGCTAGACTAATAGGCGCACCTCCTGGATACGTAGGTTATGAACAAGGCGGCTATCTAACTGAACA
TGTTAGAAGAAAACCTTATTCTGTAATCTTACTTGATGAGGTTGAAAAAGCTCATGCTGATATATTTAACATCTTACTAC
AAGTGCTTGACGATGGTCGCCTAACAGATGGGCAAGGCAGAACAGTAGACTTTAAAAATACTGTAATAGTTATGACTTCT
AACCTTGGTTCACATCGAATCCAAGAAATGCAAGGTCAGGATTATGAAACAGTAAAATCTGCTGTAATGGAAATGGTACT
TAGCCACTTTAGACCTGAATTTGTAAATAGAGTTGATGATGCAATTGTCTTTGAACCTCTAAACAAAGAGATGATAACTG
AAATAGCTAAAATACAAATCAAACGCTTAGAAAAACGTCTAGCAGATCTAAGTATAGGATTAGAAGTCACAACTGAAGCT
ATGGATAAACTAGCTGATGCTGGCTTTGATCCTGTGTTTGGTGCTAGACCGCTTAAGCGCGCTATTCAAAACAACTTAGA
AAACCCTCTGGCTCTAAAACTTCTAGATGGTGAGTTTAAAGCTGAAGATAAAATAGTTGTCGATATTGACGCTAATAACA
ATATTACATTCTCTAAATAA

Protein sequence :
MDINKFTIKLQEALAEAQSYAFQQKATEFTSAHILKALLEQNDSVAISILSVCGVNIQNFIKAVNDMVDSVAVLSGEGNP
QVTPSRDLIATLHKMQGLANKNDDEFISSEVFLLASLEDKSLTGLYNKFGITKEKLTKAVNDYRGGEKVSSQNQEDMKGA
LDKYTVDLTDLARKGKIDPIIGRDSEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSL
DMGALLAGAKFRGDFEERLKSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYR
EYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHRYITDRQLPDKAIDLVDEAASQ
IRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELE
KAKFELEKYQRVGDLSKMAELQYGKIPELEAQIKQIEETEAEPSENKLVRTSVTENEIADVVSKATGIPVSKMMEGEKDK
LLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTELTKALAEFLFDDEDAMLRVDMSEFM
EKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSVILLDEVEKAHADIFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTS
NLGSHRIQEMQGQDYETVKSAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLEVTTEA
MDKLADAGFDPVFGARPLKRAIQNNLENPLALKLLDGEFKAEDKIVVDIDANNNITFSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-106 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpB YP_007011201.1 chaperone clpB VFG2076 Protein 5e-117 41