Gene Information

Name : F92_03235 (F92_03235)
Accession : YP_007008755.1
Strain : Francisella tularensis F92
Genome accession: NC_019537
Putative virulence/resistance : Virulence
Product : glycosyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 577943 - 578575 bp
Length : 633 bp
Strand : +
Note : COG2148 Sugar transferases involved in lipopolysaccharide synthesis

DNA sequence :
ATGGGTAGTGGTTTTATGTTTTATAAGGTTTTTAAAAGATTGCTTGATATTTTACTTTCTTTTATGGGGTTGTTGTTATT
AAGTCCTATTTTCTTAATTATTATTTTTATGATAAAGAAAGATTCAAAAGGACCTATATTTTTTAAACAAAAGCGATATG
GTAAAGATAAGCAATTTTTTTACATATATAAGTTTAGAACTATGTATGTTGATACTCCAAAAGATATGCCAACGCACATG
TTACAGGATCCATCGAAATGTATAACTAAGGTTGGAGGATTTTTAAGGAAATCATCTTTAGATGAGTTGCCACAAATTAT
AAATATTCTAAAAGGTGAAATGAGCATCGTGGGTCCAAGACCAGCATTATGGAATCAAGATGACTTAATAGCACAAAGAG
ATAAGTATGGGGCAAATGCTGTGCCTGTGGGACTGACTGGCTGGGCACAGATTAATGGTAGGGATGAATTACCAATACCT
GATAAAGCTAAACTTGATGGTGATTATGTAAAAAATAAAAGTACATGGTTTGATTTAAAATGTATTTTTTTGACAGTATT
TTCTGTTTTTGCCAAAAAGGGCGTCGTTGAGGGTGGTACTGGAGCTTTAGGTAACAAAGGGGATTTAAAGTAG

Protein sequence :
MGSGFMFYKVFKRLLDILLSFMGLLLLSPIFLIIIFMIKKDSKGPIFFKQKRYGKDKQFFYIYKFRTMYVDTPKDMPTHM
LQDPSKCITKVGGFLRKSSLDELPQIINILKGEMSIVGPRPALWNQDDLIAQRDKYGANAVPVGLTGWAQINGRDELPIP
DKAKLDGDYVKNKSTWFDLKCIFLTVFSVFAKKGVVEGGTGALGNKGDLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 6e-26 50
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-27 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
F92_03235 YP_007008755.1 glycosyltransferase VFG1369 Protein 4e-39 60
F92_03235 YP_007008755.1 glycosyltransferase VFG1309 Protein 6e-28 46