Gene Information

Name : ANA_C20171 (ANA_C20171)
Accession : YP_007000685.1
Strain :
Genome accession: NC_019439
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp family protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.4.21.92
Position : 204465 - 206981 bp
Length : 2517 bp
Strand : +
Note : -

DNA sequence :
GTGCTAAAATCAGCATACCGGCACGACGCAGGTGATAGGAAAAATGCCATGTTTGAGCGCTTCACAGAAAAAGCCATTAA
GGTAATCATGCTGGCCCAAGAAGAGGCCCGCCGTTTAGGTCACAACTTTGTCGGAACTGAGCAGATCCTCTTGGGTTTGA
TTGGTGAAGGCACAGGAGTAGCCGCCAAGGTGCTGAAATCAATGGGAGTTAATCTCAAAGATGCTCGCATTGAAGTTGAA
AAAATCATAGGACGGGGTTCAGGCTTTGTAGCCGTGGAAATTCCGTTTACGCCACGGGCAAAACGGGTTTTAGAACTATC
CTTGGAAGAAGCACGCCAATTGGGGCATAACTACATTGGTACCGAGCATCTGTTGTTGGGCCTGATCCGCGAAGGGGAAG
GTGTCGCAGCCAGAGTGCTAGAAAACCTCGGTGTAGATTTGACCAAGGTGAGAACCCAAGTGATTCGGATGTTGGGAGAA
ACGGCGGAAGTTACGCCGGGTGGCCCCTCTGGTCGCACTAAAACCCCAACTCTCGATGAGTTTGGATCAAACCTGACCCA
AATGGCTATAGATAACAAGCTTGATCCTGTGGTGGGACGCGCCAAGGAAATCGAGCGAGTTATCCAAATTTTGGGTCGCC
GGACTAAAAACAATCCAGTTTTGATTGGTGAACCTGGTGTTGGTAAAACCGCCATCGCTGAAGGTTTAGCTTCACGCATC
GCCAGCAAGGATATCCCCGATATCTTGGAAGATAAGCGTGTAGTCACTCTTGATATTGGTTTGCTAGTAGCAGGAACTAA
ATATCGGGGTGAATTTGAAGAACGTCTCAAAAAAATTATGGATGAAATCCGCTCTGCGGGTAATGTCATCCTAGTAATTG
ACGAAGTTCACACCTTAATTGGTGCGGGTGCTGCCGAAGGGGCGATTGATGCGGCGAATATCCTCAAGCCAGCTTTGGCG
CGAGGTGAGTTGCAATGTATCGGCGCTACTACTTTGGATGAGTACCGTAAACACATTGAACGGGATGCAGCGTTGGAAAG
ACGCTTCCAGCCTGTAATGGTGGGTGAACCTTCTGTTGATGAAACAATAGAAATTTTATATGGTTTGCGCGATCGCTATG
AAGCACACCACAAACTGAAGATATCCGATGAAGCATTGGTGGCGGCGGCGAAATTGTCTGATCGTTATATTAGCGATCGC
TTTTTGCCAGATAAAGCCATTGACTTGATGGATGAAGCGGGTTCACGGGTGCGCCTGATTAACTCCCAACTGCCCCCAGC
CGCGAAGGAGTTAGACAAGGAACTACGGCAAATCTTAAAAGAAAAAGATGATGCAGTCCGTTCCCAGGACTTTGATCGAG
CAGGAGAACTGCGTGATCGGGAAATGGAAATCAAAGCCGAAATCCGCACTATTGCTCAAACTAAGAGTAATGGCGCTAGT
GGTGACGGTGTTGAACCTGTAGTTACAGAAGAAGACATTGCTCACATTGTCGCTTCCTGGACAGGTGTACCGGTGAACAA
ACTCACCGAGTCTGAGTCCGAGAAGTTGCTGCACATGGAAGACACCTTACATCAGCGGCTCATCGGTCAAGAAGACGCTG
TGAAGGCTGTTTCCAGGGCTATTCGTCGCGCTCGCGTTGGCTTGAAGAATCCGAATCGGCCGATTGCTAGTTTTGTCTTC
TCTGGTCCGACTGGGGTAGGTAAAACCGAATTAGCGAAATCCTTGGCTTCCTACTTCTTCGGTGCTGAAGAAGCCATGAT
TCGCTTGGATATGTCCGAATACATGGAGCGTCACACCGTCAGTAAATTGATCGGTTCACCTCCTGGTTATGTCGGTTACA
ACGAAGGTGGTCAGTTAACAGAAGCTGTCCGTCGTCGTCCTTACACTGTGGTGCTATTCGACGAAATCGAAAAAGCACAC
CCCGATGTGTTCAATATGCTTTTGCAAATTTTGGAAGACGGGCGTTTAACTGACGCAAAAGGTCGCACGGTGGACTTTAA
GAACACCTTGCTGATTTTGACTTCCAACATTGGTTCTAAGGTGATTGAAAAAGGTGGTAGCGGTATCGGCTTCGAGTTCT
CTGAAGATGCGACTGAGACACAATACAACAGAATTCGCTCTTTGGTGAATGAGGAACTGAAGCAATACTTCCGTCCTGAG
TTCCTGAACCGGTTAGATGAAATTATCGTCTTCCGTCAGTTGAATAAGTTGGAAGTTACCCAAATTGCCGAAATCATGTT
GAAGGAAGTGTTTGGTAGGTTGACGGAAAAAGGCATTGTCTTAGAAGTCACTGACCGCTTCAAGGATCGCTTGATAACTG
AGGGTTATAGTCCTAGCTACGGTGCAAGGCCATTACGTCGGGCAATTATGCGCTTATTGGAAGATAGTCTGGCGGAAGAA
ATTCTGTCTGGACGCATCAAAGATGGCGATACTGCTCTTGTTGATGTTGATGAAAATGGCATTGTTCAAGTTAGTTCTCA
ACGAACACGGGAGTTGTTAACCCCTGTTGAGTCTTAA

Protein sequence :
MLKSAYRHDAGDRKNAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVE
KIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGVDLTKVRTQVIRMLGE
TAEVTPGGPSGRTKTPTLDEFGSNLTQMAIDNKLDPVVGRAKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLASRI
ASKDIPDILEDKRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALA
RGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETIEILYGLRDRYEAHHKLKISDEALVAAAKLSDRYISDR
FLPDKAIDLMDEAGSRVRLINSQLPPAAKELDKELRQILKEKDDAVRSQDFDRAGELRDREMEIKAEIRTIAQTKSNGAS
GDGVEPVVTEEDIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIGQEDAVKAVSRAIRRARVGLKNPNRPIASFVF
SGPTGVGKTELAKSLASYFFGAEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQLTEAVRRRPYTVVLFDEIEKAH
PDVFNMLLQILEDGRLTDAKGRTVDFKNTLLILTSNIGSKVIEKGGSGIGFEFSEDATETQYNRIRSLVNEELKQYFRPE
FLNRLDEIIVFRQLNKLEVTQIAEIMLKEVFGRLTEKGIVLEVTDRFKDRLITEGYSPSYGARPLRRAIMRLLEDSLAEE
ILSGRIKDGDTALVDVDENGIVQVSSQRTRELLTPVES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ANA_C20171 YP_007000685.1 ATP-dependent Clp family protein VFG0079 Protein 0.0 60
ANA_C20171 YP_007000685.1 ATP-dependent Clp family protein VFG0080 Protein 6e-157 54