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Name : hsdM (uc509_0477) Accession : YP_006998953.1 Strain : Lactococcus lactis UC509.9 Genome accession: NC_019435 Putative virulence/resistance : Unknown Product : putative type I site-specific deoxyribonuclease Function : - COG functional category : - COG ID : - EC number : 2.1.1.72 Position : 476111 - 477658 bp Length : 1548 bp Strand : + Note : - DNA sequence : ATGGCATTATCAAATGAACAAAAAAATAAAATGTGGGCCCTCTTAAATCAAACCCGAGGACAGATTGGTTTAACCGCCTA TAAAGACTACATTTTTGGCTTACTATTTTATAAATATTTATCAGAAAAGGCCACACAATGGCTGGGAGAAGTTTTACGAG GAGACACTTGGGAAAATGTTTATGATCAAGATCCTGTAAGAGCCTTAGACTATATGAAACAAAAGCTCGGTTATGCCATC CAGCCTAAGGAATTTTTTAAAGATTGGGAAGCTGCCATTCATGAAGAACGATTTAACATTCCAATGATTTCAGATACATT TGGCCATTTTAATCAGCAAATTGCTTTTGAAGCTAAAGATGATTTTGAAGGCATCTTTGATGGGATGCGTTTTGATAGTT CTGATTTAGGAAGTAATGCGCAAGCTCGAGCAAGTGTTATGATCTCGATGATTGAGTTACTCTCTGCCCCTGAGTTTGAT CTGTCTACAGGAGGGGACACCGTTTCAGATATCTACGAATACTTGTTAGAAAAGTTTGCGACCGTATTGGCCTCAGACAT GGGACAATACTATACTCCCAAAGAAATTTCAGAGGTCATGGCTCGTATTTTGACTTTTGGTAAAGCCGACGAAGACAATT TTTCTATTTATGATCCAGCGGTCGGTTCAGCTTCTCTCTTAATTACTACCGCCAGTCATATGAAACATTCCAATCAAAGG GGAGCGATTAAATACTTTGGTCAAGAAAAAGATGCCACCCCTTACCGATTGGCTCGAATGAATTTAATGATGCATAACAT TGAATACAATGATATTCAGATCCATCATGCGGACACATTGGAGAGCGATTGGCCTGACGGAGTCATTGAAGGGAAAGATA CGCCTCGAATGTTTGACGCAGTGATGGCTAATCCACCTTATTCTGCCCATTGGAATAATAAGGATCGGGAAGATGACCCT CGATTTCGTGAATATGGCATTGCGCCAAAAACTAAAGCGGACTATTCTTTCTTGTTGCATTGTTTGTACCATACCAAAGA GAGTGGCCGCGTGGCCATTATCCTCCCACACGGGGTCTTGTTTAGAGGCGCTGCGGAAGGACGGATTCGAAAAGCTTTGA TTGATAAACATCAAATTGAAGCGGTAATTGGTTTTCCAGATAAACTCTTTTTGAACACAGGCATTCCCGTTTGTGTCTTA ATTCTTAAAAAGAATCGAGCAAACTCTGATATTCTTTTTGTGGACGCAAGTCAAGGCTTTGAAAAGATGAAGAATCAAAA ACAATTGCGCCCAGAAGATATTGACAAGATCACTGAAACAGTCATTCATCGCAAGGCGGTTGATAAATATAGCCACTTAG CAACGCTTGAGGAAGTCATTGAGAATGATTACAACTTAAATATTCCGCGTTATGTGGATACCTTTGAAGAGGAAGAGCCG ATTGACTTAGCGGATATTCAAGGTCAAATAGATGAAGTAGACGCAGAGATTGCGAAAGCTAACCAAACCTTAGCAAACTA CTTTAAGGAACTGGGAGTGTTGAAATGA Protein sequence : MALSNEQKNKMWALLNQTRGQIGLTAYKDYIFGLLFYKYLSEKATQWLGEVLRGDTWENVYDQDPVRALDYMKQKLGYAI QPKEFFKDWEAAIHEERFNIPMISDTFGHFNQQIAFEAKDDFEGIFDGMRFDSSDLGSNAQARASVMISMIELLSAPEFD LSTGGDTVSDIYEYLLEKFATVLASDMGQYYTPKEISEVMARILTFGKADEDNFSIYDPAVGSASLLITTASHMKHSNQR GAIKYFGQEKDATPYRLARMNLMMHNIEYNDIQIHHADTLESDWPDGVIEGKDTPRMFDAVMANPPYSAHWNNKDREDDP RFREYGIAPKTKADYSFLLHCLYHTKESGRVAIILPHGVLFRGAAEGRIRKALIDKHQIEAVIGFPDKLFLNTGIPVCVL ILKKNRANSDILFVDASQGFEKMKNQKQLRPEDIDKITETVIHRKAVDKYSHLATLEEVIENDYNLNIPRYVDTFEEEEP IDLADIQGQIDEVDAEIAKANQTLANYFKELGVLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0053 | YP_300143.1 | type I restriction-modification system methyltransferase subunit | Not tested | SCC15305cap | Protein | 3e-96 | 41 |
| SAR1899 | YP_041281.1 | type I restriction modification system modification protein | Not tested | vSa¥â | Protein | 1e-94 | 41 |
| SAS0394 | YP_042520.1 | restriction enzyme modification protein | Not tested | vSa¥á | Protein | 8e-95 | 41 |
| SAMSHR1132_03780 | YP_005324900.1 | putative type I restriction enzyme modification protein | Not tested | vSa¥á | Protein | 8e-95 | 41 |
| SAMSHR1132_16570 | YP_005326167.1 | restriction-modification system, M subunit | Not tested | vSa¥â | Protein | 6e-95 | 41 |
| SAR0433 | YP_039884.1 | type I restriction enzyme modification protein | Not tested | vSa¥á | Protein | 5e-95 | 41 |
