Gene Information

Name : llrA (uc509_1540)
Accession : YP_006999852.1
Strain : Lactococcus lactis UC509.9
Genome accession: NC_019435
Putative virulence/resistance : Virulence
Product : two-component system regulator llrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1528406 - 1529098 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATCAAAGAAAATTTTGATTATTGAGGATGAAAAGAATTTAGCTCGTTTCGTCTCATTAGAATTAGAGCATGAAGG
CTATGCCACTGAGATTAAAGATAACGGACGTTCTGGGCTTGAAGAAGCAACTTCAAAAGATTATGATTTAATCTTGCTTG
ATTTGATGCTTCCTGAACTTGATGGTTTTGAAGTTGCCCGCCGTTTGCGCAAAGAAAAAGATACTCCAATTATTATGATG
ACCGCGCGTGATTCAACAATGGAACGTGTTGCCGGTCTTGATATTGGAGCAGATGATTATATTACTAAGCCTTTTGCGAT
TGAAGAACTTTTGGCTCGTGTTCGTGCATTCTTCCGTCGTGAAGAACATGGTCATGCTGTAGAACGTGCTGAAAACACTT
CTTTTCGTGATCTTGTAATTGACAAAACAAATCGTACCGTTCACCGCGGTAAAAAAGTAATTGATTTGACGCGTCGTGAA
TACGATCTTCTTTTGACGTTGATGCAAAATGTTGGGGATGTTGTCACTCGCGAACATTTAGTTTCACAAGTTTGGGGATA
TGAAGAAGGAACGGAAACAAATGTTGTTGATGTATATATCCGCTATCTTAGAAATAAAATTGATGTTGAAGGACAAGACA
GCTATATTCAAACCGTTCGTGGTTTGGGTTATGTGATGCGTGAACGCAAATAA

Protein sequence : 
MASKKILIIEDEKNLARFVSLELEHEGYATEIKDNGRSGLEEATSKDYDLILLDLMLPELDGFEVARRLRKEKDTPIIMM
TARDSTMERVAGLDIGADDYITKPFAIEELLARVRAFFRREEHGHAVERAENTSFRDLVIDKTNRTVHRGKKVIDLTRRE
YDLLLTLMQNVGDVVTREHLVSQVWGYEEGTETNVVDVYIRYLRNKIDVEGQDSYIQTVRGLGYVMRERK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-31 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-30 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
llrA YP_006999852.1 two-component system regulator llrA HE999704.1.gene1528. Protein 2e-56 63
llrA YP_006999852.1 two-component system regulator llrA NC_003923.1003417.p0 Protein 1e-44 51
llrA YP_006999852.1 two-component system regulator llrA NC_013450.8614146.p0 Protein 1e-44 51
llrA YP_006999852.1 two-component system regulator llrA NC_002951.3238224.p0 Protein 1e-44 51
llrA YP_006999852.1 two-component system regulator llrA NC_007793.3914065.p0 Protein 1e-44 51
llrA YP_006999852.1 two-component system regulator llrA NC_002758.1121390.p0 Protein 1e-44 51
llrA YP_006999852.1 two-component system regulator llrA NC_010079.5776364.p0 Protein 1e-44 51
llrA YP_006999852.1 two-component system regulator llrA NC_002952.2859858.p0 Protein 1e-44 51
llrA YP_006999852.1 two-component system regulator llrA NC_007622.3794948.p0 Protein 1e-44 51
llrA YP_006999852.1 two-component system regulator llrA AE015929.1.gene1106. Protein 5e-42 51
llrA YP_006999852.1 two-component system regulator llrA BAC0308 Protein 1e-32 44
llrA YP_006999852.1 two-component system regulator llrA BAC0125 Protein 1e-31 44
llrA YP_006999852.1 two-component system regulator llrA BAC0197 Protein 4e-32 43
llrA YP_006999852.1 two-component system regulator llrA NC_012469.1.7685629. Protein 8e-35 43
llrA YP_006999852.1 two-component system regulator llrA BAC0111 Protein 3e-31 42
llrA YP_006999852.1 two-component system regulator llrA AE016830.1.gene1681. Protein 2e-34 41
llrA YP_006999852.1 two-component system regulator llrA BAC0083 Protein 2e-31 41
llrA YP_006999852.1 two-component system regulator llrA HE999704.1.gene2815. Protein 1e-33 41
llrA YP_006999852.1 two-component system regulator llrA AE000516.2.gene3505. Protein 4e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
llrA YP_006999852.1 two-component system regulator llrA VFG0596 Protein 1e-31 46
llrA YP_006999852.1 two-component system regulator llrA VFG1390 Protein 4e-41 45
llrA YP_006999852.1 two-component system regulator llrA VFG1389 Protein 2e-32 41