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Name : ccrB5 (BN424_92) Accession : YP_006990890.2 Strain : Carnobacterium maltaromaticum LMA28 Genome accession: NC_019425 Putative virulence/resistance : Unknown Product : resolvase, N terminal domain protein Function : - COG functional category : - COG ID : - EC number : - Position : 95659 - 97299 bp Length : 1641 bp Strand : + Note : [L] COG1961 Site-specific recombinases, DNA invertase Pin homologs DNA sequence : ATGGAAGAACCTATTGAAAGAAAACGAGTCGCTGGATACATTCGGGTTTCCACAGAAGAACAAGCCGAGGAAGGGTATTC CTTAGATGCTCAAAGAGAGAACATTTTACGTTTCTGTGACCAACACCACTACGAATTGGTGGATGTCTATGCCGATGAGG GAATTAGTGGGAAAACGATTGAGAAGCGCCCAGGCATCAAATGCCTAATGGCAGATGCATCAAAAAACAAATTTGATTTA GTAGTTGTATGGAAATTGACTCGTTTAGGCAGAAGTATTAAGGATGTATTGGGCATTGCAGAATTGCTGTTTGCGAACAA TGTTGAATTCAGGTCTATTTCAGAAAACTTTGATATTTCAACGAGTACAGGTCGCTTGATGTTCCAAATGCTGGGGGTGT TTGGAGAATTTGAACGGAATCAGATATCTGAAAATGTCTCCATGGCTATGACCAGCTTAGTCAAACATAAGAAACGGTTT GCAGGTGGACGAATGTTAGGTTATGTGAGCGCTGTAGATGAGAGTGGAGTGAAAATACTTCAAGTAGAACCGAATGAAGC TGAAATTGTCCGTCTTATCTTTGGGCAGTATCTTCAAGGGAAGGGGTACCGAGCCATCGCCAATTTTCTCAATAAGCAGG GCTATCAAACTGTAAAAGGAAATTCGTTTACCACCATTGCTGTAAAGGGAATCTTGATGAATCCTACCTATGCAGGGTAC TTACGGTATGGAAAGTACATCAATTGGGAAGAAAAGCGCCGAAAGGGGCTAAATCCTCATCCCATACAGGTAGAAGGTTC TCATGAACCCATTATTGAAAAAGAGGTCTATCATCATATCCAAGAGAAACTAAAGGTCAATCATGCCCAACCTAAATGGA CTCATAATGGTGAAAACGTATTAACAGGCTTATTGAAATGCCCTGAATGTGGAGCCCCAATGGCGGCTTCAAATACGACC AATACCTTAAAGGATGGCACCAAAAAGAGAATGCGCTACTATTCGTGTTCAGTATTTCGTTCCAAAGGTTCGAGTATCTG TCATGCCAATTCCATTCGTGCAGAAGTTGCAGAAACCTTTGTCGAAGAACGCCTGAAGGAAGTGGTGCTGTTGCCAGCTC ACTTGAAGGAAATCATTAAAGGATTGAATAAGGAGCTCAAGGAGCAACGTGCCCCATTAGAGCTAGAACAAAAAGTAGTC CAGCAACAGGAACATGACATTCAAGCTAAAATCACCAAATGGAAAAGCTTAATCAATGATACGCCAGAGCTGGCAAAAGA ATTAGAAGCACGAATGAAGGAGCTAGAGATTGAACTGGCTGTAACGAGACAACGTAGGCAAACCATTGCCACATTTTTAG AAAAGGAAGGCGTGCAACTCAATCCAGCAGAAGTTGAAAAGATGCTTCATTATGTGAATGCTTTACTGGAAGGACGAAAC AAAAAGGACATTAAAGCCATCTATCGAACCTTTATTGAGTCCATTACCTTTAACAAAGAAACAAAAGGAGACATCCAAAT TAGGATGTTGTTTGATGCTCCTATTATTAACCAATTGAATCAAGTCTATCAAGCAGGGGGAACTTCTCAAGTAGGAGTTT CTCCTGTTTCTTTGTCGTCTCCAATTCAGATTACCGTGTAA Protein sequence : MEEPIERKRVAGYIRVSTEEQAEEGYSLDAQRENILRFCDQHHYELVDVYADEGISGKTIEKRPGIKCLMADASKNKFDL VVVWKLTRLGRSIKDVLGIAELLFANNVEFRSISENFDISTSTGRLMFQMLGVFGEFERNQISENVSMAMTSLVKHKKRF AGGRMLGYVSAVDESGVKILQVEPNEAEIVRLIFGQYLQGKGYRAIANFLNKQGYQTVKGNSFTTIAVKGILMNPTYAGY LRYGKYINWEEKRRKGLNPHPIQVEGSHEPIIEKEVYHHIQEKLKVNHAQPKWTHNGENVLTGLLKCPECGAPMAASNTT NTLKDGTKKRMRYYSCSVFRSKGSSICHANSIRAEVAETFVEERLKEVVLLPAHLKEIIKGLNKELKEQRAPLELEQKVV QQQEHDIQAKITKWKSLINDTPELAKELEARMKELEIELAVTRQRRQTIATFLEKEGVQLNPAEVEKMLHYVNALLEGRN KKDIKAIYRTFIESITFNKETKGDIQIRMLFDAPIINQLNQVYQAGGTSQVGVSPVSLSSPIQITV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccrB | YP_042165.1 | site-specific recombinase | Not tested | SCC476 | Protein | 6e-87 | 41 |
| ccrB3 | BAB46972.1 | cassette chromosome recombinase B3 | Not tested | Type-IIIinv SCCmec | Protein | 3e-87 | 41 |
| ccrB3 | BAB47597.1 | cassette chromosome recombinase B3 | Not tested | Type-III SCCmec | Protein | 3e-87 | 41 |
