Gene Information

Name : tnp (BN424_884)
Accession : YP_006991663.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Unknown
Product : transposase, Mutator family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 942693 - 943853 bp
Length : 1161 bp
Strand : -
Note : [L] COG3328 Transposase and inactivated derivatives

DNA sequence :
ATGACCCAAGTACATTTTACACTGAATACCGAAAAGGTTCCAAGGATTATTGAATATTCCATAAAAGATGACGTGTCTAA
AAATATTTTGACCACGGTTTTCAATCAATTAATGGACAATCAAAGAACCGAATACATTCAAGCCGAACACTATGAACGGT
CTGAAAATAGACAAAGTCAACGAAATGGATACTACGAGAGGAACTATACAACACGTGTTGGTACACTTGAATTAAAAGTA
CCTAGAACACGTGATGGCAAGTTTTCTCCTACGATATTTGAACGATATCACAGAAATGAAAAAGCCTTGCTTGCTTCAAT
GATTGAGATGTATGTCTCCGGTGTTTCTACACGAAAAGTTTCAAAAATTGTTGAAGAACTGTGTGGGAAATCGGTGTCTA
AATCCTTTGTTTCTAGTCTGACTGAACAGTTAGACCCTATGGTCAATGAGTGCCAGAATCACTTGCTCTCAGAGAAAAAT
TATCCATACTTGATGACAGATGTTCTTTATATAAAAGTACGAGAAGAGAATAGAGTTCTTTCTAAAAGCTGCCATATCGC
TATTGGAATAAGCAAAGACGGGGATCGTGAGATCCTCGGATTCATGATTCAAAATGAAGAAAGTGAGGATACCTGGTCCT
ACTTCTTTGAACACCTAAAAAACAGAGGATTACGAGGAACTGAACTTGTGATTTCCGATGCTCATAAAGGCTTAGTTTCT
GCGGTTCGTCAGTCGTTTCTCAATGCAAGTTGGCAGAGATGTCAAGTTCACTTTTTAAGAAACATCCTTACGAGTATTCC
TAAAAAGAATTCAAAACCTTTTAGAGAGGCCGTAAAAGCAATCTTTAAATTTACAGATATCAACCTAGCACGGGTAGCTA
AAAATCGCCTGGTCAGTGACTATATTGACCAGGTAAAATATTCAAAAGCTTGTGAAACCCTGGACAATGGCTTCGAAGAT
GCTTTTCAATATACCTTATTTGGGAATGTCCACAATCGTTTAAAAAGTACCAACCTTCTTGAGCGATTGAACCAAGAAGT
GCGCAGAAGAGAAAAAAATATTCGTATCTTTGCAAACTGCGTTTCAGCCAATCGTTTAATCGGAGCAGTCCTTATTGATC
AACACGATGAGTGGGTTTGTTCATCAAGTAAAATATATTAA

Protein sequence :
MTQVHFTLNTEKVPRIIEYSIKDDVSKNILTTVFNQLMDNQRTEYIQAEHYERSENRQSQRNGYYERNYTTRVGTLELKV
PRTRDGKFSPTIFERYHRNEKALLASMIEMYVSGVSTRKVSKIVEELCGKSVSKSFVSSLTEQLDPMVNECQNHLLSEKN
YPYLMTDVLYIKVREENRVLSKSCHIAIGISKDGDREILGFMIQNEESEDTWSYFFEHLKNRGLRGTELVISDAHKGLVS
AVRQSFLNASWQRCQVHFLRNILTSIPKKNSKPFREAVKAIFKFTDINLARVAKNRLVSDYIDQVKYSKACETLDNGFED
AFQYTLFGNVHNRLKSTNLLERLNQEVRRREKNIRIFANCVSANRLIGAVLIDQHDEWVCSSSKIY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0529 NP_814305.1 IS256, transposase Not tested Not named Protein 2e-150 85
SERP1584 YP_189149.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 2e-150 85
SERP1587 YP_189152.1 IS256-like transposase Not tested ¥ÕSP¥â Protein 2e-150 85
IS256 BAC22941.1 IS256 transposase Not tested etd PI Protein 1e-150 85
unnamed BAC67572.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 1e-150 85
unnamed BAC67574.1 transposase for insertion sequence element IS256 in transposon Tn4001 Not tested Type-IVc SCCmec Protein 1e-150 85