Gene Information

Name : resD (BN424_801)
Accession : YP_006991580.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 859335 - 860054 bp
Length : 720 bp
Strand : +
Note : [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGAAAATATTAATGATAGAAGATAACCAATCTGTTTGTGAAATGATGGAAATGTTTTTTTTGAAGGAAAATTGGGATGC
TACGTTTAAACAAGACGGAAAAGAGGGCTTAGATGCTTTTTTAGAGCAGCCAGATTCTTGGGATATTGTGACACTAGATT
TAAATTTACCAACAATGGATGGAATTCAAATCTGCCGTGAAATTCGTAAAGTATCGGAGACAGTGCCGATTATCATGTTA
ACAGCTAAAGATTCAGAGAGCGATCAAGTGATTGGCTTGGAAATGGGCGCAGATGACTATGTAACGAAGCCTTTTAGTCC
ACTAACACTAATTGCCAGACTGAAGGCGTTACACCGTAGAGCAGATTTAACTAGCCATGAAGAAGTACCAAAGCATAAGT
TGGATGAAGATTTTGAAGTGGCAACAGATCATTTGAAAATTAACACAAAAACACGAGAAGCTTTCTTATTTGAAAAGCCG
ATTGAAGGATTAACACCAAAAGAATTTGAATTGCTTTATACATTAGCTAAAAGTCCAAAGCAAGTTTTTTCTCGAGAGCA
GTTACTAACATTAGTTTGGGATTATCAATATTATGGGGATGAACGAACAGTTGATGCTCATATTAAAAAATTACGCCAAA
AAATTGAAAAAACAGGTCCGCAAGTGATTCAAACAGTTTGGGGAGTGGGCTATAAATTTGACGACAGCGGAGTTGAATAG

Protein sequence : 
MKILMIEDNQSVCEMMEMFFLKENWDATFKQDGKEGLDAFLEQPDSWDIVTLDLNLPTMDGIQICREIRKVSETVPIIML
TAKDSESDQVIGLEMGADDYVTKPFSPLTLIARLKALHRRADLTSHEEVPKHKLDEDFEVATDHLKINTKTREAFLFEKP
IEGLTPKEFELLYTLAKSPKQVFSREQLLTLVWDYQYYGDERTVDAHIKKLRQKIEKTGPQVIQTVWGVGYKFDDSGVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-39 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 4e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
resD YP_006991580.2 response regulator NC_012469.1.7685629. Protein 3e-40 44
resD YP_006991580.2 response regulator HE999704.1.gene2815. Protein 2e-41 43
resD YP_006991580.2 response regulator AF155139.2.orf0.gene Protein 3e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
resD YP_006991580.2 response regulator VFG1563 Protein 2e-39 42
resD YP_006991580.2 response regulator VFG1702 Protein 2e-39 42