|
Name : tex (BN424_635) Accession : YP_006991415.2 Strain : Carnobacterium maltaromaticum LMA28 Genome accession: NC_019425 Putative virulence/resistance : Unknown Product : S1 RNA binding domain protein Function : - COG functional category : - COG ID : - EC number : - Position : 680091 - 682274 bp Length : 2184 bp Strand : + Note : [K] COG2183 Transcriptional accessory protein DNA sequence : ATGGCTGAAAATAATGATGCAACAATTTTACAACTATTAAAGAAAGAATTAAAAATTTATAGTGATAAACAATTAAAAAC CGTTTTAGACTTGTTAGCGGAAGGGAACACAGTCCCTTTTATTGCGCGTTATCGAAAAGAAATGACGGGAACCTTGGATG AAGTCCAAATTCGTGAGATTGAAGATCGCTATACGTATTTACAAAATTTAGAAAAACGTAAAGGCGAAGTATTACGCATT ATTGAAGAGCAAGGTAAATTAACTCCTGAGTTGCAAAAATCGATTGAAACAGCGGATAAAATGCAGTTGGTGGAAGATTT ATATCGTCCATACAAACAAAAACGCCGTACAAAAGCGACGATTGCTAAAGAAAAAGGGCTAGAACCGTTGGCGAAATGGT TGCTGACTTTTCCAATGAATGTTGATGTGGAAAAAGAAGCGCAAAACTATTTAGATGCTGAAAAAGAAGTTACAACAGTA GAAGAAGCTTTGGCTGGCGCTCATGAAATTTTAGCAGAAAGTATAAGTGATGAGCCTAAGTATCGGATTTGGATTAGAGA ATTTACGATGCGAAATGGCATTGTGACGAGTGCAGTTAAAGATGCCGAAAAAGATGAAAAAGGCGTTTATGAAATGTACT ATGAGTTTAGTGAACCTGTTGCCAAGCTAGTTTCTCATCGTATTCTAGCTCTAAATCGTGGTGAAAAAGAAGATATCTTG AAAGTGTCTGTTTTAGTGGATGAAGAAAGAATCGGTAAATACTTTGCACGAGAGCTAATCAAAAATGAAGATTCACCAGC AACACCGTATATTGTGGGAGCTTATGAAGATAGTTATAAACGTTTTATCGGCCCAGCAATTGAACGTGAAATCCGTGGCG AATTAACAGAAAAAGCAGATGAACAAGCAATCAATATCTTTGGCGAGAATTTGCGTAATCTGTTATTACAAGCCCCTTTA AAAGGGAAAATGGTCTTGGGATTAGATCCAGCTTACCGTACAGGGTGTAAGTTAGCAGTTATAGACCCAACAGGAAAAGT CACTGATATTGATGTGATTTACCCCCATAAACCTGCTGGAGCTAGTGCGCGCAGTGAAGCAGCAACGAAGTTTAAAAAAA TTGTTAAAGATTTTGGGATTGAAATGATCGCGATTGGAAACGGTACAGCTAGTCGTGAATCTGAGCAATTTGTTGTGGAT AATTTAAAAGAAATTGATCAAGAAGTTTATTATGTGATTGTGAACGAGGCTGGCGCCTCTGTTTATTCTGCTAGTGATTT AGCTCGTAAAGAGTTTCCTGATTTGCAGGTTGAGCAAAGAAGTGCTGTAAGTATCGCTCGTCGTTTGCAAGATCCGTTAG CTGAATTAGTTAAAATTGATCCAAAGGCAGTTGGAGTTGGTCAATATCAACATGATGTTTCACAAAAACGACTAGAAGAA CGTTTAGAGTTTGTTGTGGAAACAGCGGTTAACCAAGTTGGCGTTAATGTTAATACAGCTAGTGCGCCTTTGTTGCAACA TGTAGCAGGCTTAAATAAAACAACTGCAACGAATGTTGTAGCTTATCGAGATGAAAATGGTCGTTTTGAAAGTCGGGCAG CGTTGAAAAAAGTTCCTCGTCTAGGACCTAAAGCATACGAGCAAGCGGTTGGATTTATGCGAATTGTAGATGGGAAAAAT ATTTTAGATAATACTGGAATTCATCCAGAAACGTATAAAGAGGCAAAAGAAATTCTAGCAATGGCAGAGTTGGATTTAAA AGATGTCGGAAGTACTACGGCTAAAGAGGCTTTAGCTAAATTGAATTTCCAACAAGTTGCAGACCAAACTGGCTTAGGGA AAGAAACCGTTAAAGATATGATTGAAGCTTTATCTAGACCAGGGCGCGATTTGCGTGATGAATTACCAGCTCCATTATTG CGCAAAGATGTTTTAACAATGGAAGACTTAAAAGCCGGTATGGAATTACAAGGTACGGTTCGAAATGTCGTCGATTTTGG TGCATTTGTGGATATTGGTGTGAAGCAAGATGGTATGGTGCATATTTCTAAATTAAGCAATGGCTATGTGAAACATCCAA CTGATGTCGTAGCTGTTGGAGATGTTGTAACAGTGTGGGTGGATTCAATTGATCTGAAAAAAGGTCGAATTGCCTTAACA ATGTTAAATCAAGAACAAAAATAA Protein sequence : MAENNDATILQLLKKELKIYSDKQLKTVLDLLAEGNTVPFIARYRKEMTGTLDEVQIREIEDRYTYLQNLEKRKGEVLRI IEEQGKLTPELQKSIETADKMQLVEDLYRPYKQKRRTKATIAKEKGLEPLAKWLLTFPMNVDVEKEAQNYLDAEKEVTTV EEALAGAHEILAESISDEPKYRIWIREFTMRNGIVTSAVKDAEKDEKGVYEMYYEFSEPVAKLVSHRILALNRGEKEDIL KVSVLVDEERIGKYFARELIKNEDSPATPYIVGAYEDSYKRFIGPAIEREIRGELTEKADEQAINIFGENLRNLLLQAPL KGKMVLGLDPAYRTGCKLAVIDPTGKVTDIDVIYPHKPAGASARSEAATKFKKIVKDFGIEMIAIGNGTASRESEQFVVD NLKEIDQEVYYVIVNEAGASVYSASDLARKEFPDLQVEQRSAVSIARRLQDPLAELVKIDPKAVGVGQYQHDVSQKRLEE RLEFVVETAVNQVGVNVNTASAPLLQHVAGLNKTTATNVVAYRDENGRFESRAALKKVPRLGPKAYEQAVGFMRIVDGKN ILDNTGIHPETYKEAKEILAMAELDLKDVGSTTAKEALAKLNFQQVADQTGLGKETVKDMIEALSRPGRDLRDELPAPLL RKDVLTMEDLKAGMELQGTVRNVVDFGAFVDIGVKQDGMVHISKLSNGYVKHPTDVVAVGDVVTVWVDSIDLKKGRIALT MLNQEQK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 2e-131 | 45 |
