Gene Information

Name : dps (BN424_579)
Accession : YP_006991371.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Resistance
Product : DNA protection during starvation protein
Function : -
COG functional category : -
COG ID : -
EC number : 1.16.-.-
Position : 628308 - 628781 bp
Length : 474 bp
Strand : +
Note : [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant)

DNA sequence :
ATGCAAAAAACAAATATTGATGTTAAAGGAATCTTAAACAAATTAGTTGCCAACCACGGTGTGTTATACACTAAGTTACA
TCAACATCACTGGTATGTGCAAGGTGCTAGTTTTTATACATTACATGAGAAGTTTGAAGAATTATTTGGTAGTGTCGATT
CCAATAACGATGTGATTGCAGAGCGCCTAATCGCAATCGGTGGTCAACCATTCTCAACTTTATCTGAGTATTTAGAACAT
GCTTCAATTGAAGAAAAACCGTACACTAAAAAAGTTTCAGCTGAAGACATGGTAGCATCAGTTGTTCATGATTACCGTAT
CTTACGTGATGAGCTAGTTGAAGGTATTGAGTTGACTGGTGAAGCTGGAGACGATTGCACACAAGATATGTTAATTGGGT
ATAAAACAGAAATTGATAAAAATATTTGGATGTTACAAGCATTCTTAGGTCAGTCACCATTAGAAGGCGAATAA

Protein sequence :
MQKTNIDVKGILNKLVANHGVLYTKLHQHHWYVQGASFYTLHEKFEELFGSVDSNNDVIAERLIAIGGQPFSTLSEYLEH
ASIEEKPYTKKVSAEDMVASVVHDYRILRDELVEGIELTGEAGDDCTQDMLIGYKTEIDKNIWMLQAFLGQSPLEGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0606 NP_814364.1 Dps family protein Not tested Not named Protein 3e-27 41
ef0119 AAM75320.1 EF0119 Not tested Not named Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dps YP_006991371.2 DNA protection during starvation protein BAC0134 Protein 3e-22 41