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Name : lysS (BN424_476) Accession : YP_006991285.1 Strain : Carnobacterium maltaromaticum LMA28 Genome accession: NC_019425 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 524354 - 525853 bp Length : 1500 bp Strand : + Note : [J] COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGAGTAACGAAACAAACCAACAAGAAGAATTAAACGATCAATTAAAAGTGCGCCGCGAAAAAATGGAGCAATTACGAGA AAAAAATATTGATCCATTCGGTGAACGCTTTGAAAGAACGCATTTATCAAGCGAATTACATGAGGCTTATGATCGTTTCA CTAAAGAAGAGTTAGTGGAACAAAAAGAAACGGCAACAGTTGCAGGTCGGATCATGACAAAGCGTGGCAAAGGTAAAGTT GGATTTGCCCATCTCCAAGATCGTAAAGGCCAAATCCAAATATATGTACGTAAAGATGCAGTTGGTGATGATGCTTATGA TATTTTTAAAAATGCTGATTTAGGTGATTTTATTGGTGTAACAGGTGAAGTCATGAAAACTGATACTGGTGAAGTGACAA TTAAACCAACATCATTGGTTCAGTTATCAAAAGCCTTACGTCCATTACCAGATAAATATCATGGCTTAACAAACGTTGAA CAACGTTACCGTCAACGCTATTTAGATTTAATTAGTAATAAAGAAAGTTTTGATCGTTTTACAAAACGTAGTGAGATTAT TCGTGAGGTCCGTAATTACCTAAATGAGCAAGATTATTTAGAAGTTGAAACTCCAACATTGCATAACTTAGCTGGTGGAG CAGCAGCTCGTCCATTTATTACACATCATAATGCATTAGATATGGAATTGTATTTACGCATTGCCTTAGAGTTACATTTA AAACGTCTAATTGTTGGTGGTATGGAGAAAGTCTACGAGATTGGTCGAGTATTCCGTAACGAAGGTGTTGATACAACCCA TAATCCTGAATTCACCATGTTAGAAGTCTATACAGCATATACAGACTATAAAGATGTAATGGATTTAACGGAAGGTCTTA TTAAAACTGTAGCCAACCGTGTGTTAGGTACTGGTGAAATCACTTATGGTGAAGTAACCGTTGATTTAGATACTAAATGG AAACGTCAGCACATGCTAGATGCAATCAAGGAATATTCAGGTGTTGATTTTTGGCCTGTAATGTCAGATGAAGAAGCTCG TGCTTTAGCAAAAGAGAACAATGTTACTATTACAGAGCATATGCAGTATGGTCATGTAGTTAACGAGTTTTTTGAAACAT TTGTTGAAGAAAAATTAATTCAACCAACATTCATTTATGGTCATCCAGTTGAAATTTCTCCATTAGCTAAGAAGAATCCA CAAGATGGACGTTTCACAGACCGCTTTGAAGTGTTTATTGTTGGAAATGAATATGGTAATGCCTTTACTGAATTAAATGA TCCTATTGATCAAAGAGAACGTTTTGAAGCACAAATGCGTGAACGTGCAGGTGGAAATGACGAAGCGCATCAATTAGATG AAGATTTCTTAGAAGCGCTTGAATATGGAATGCCACCAACTGGCGGTTTAGGAATTGGGATTGATCGATTGGTTATGCTG TTAACAGACGCATCGGCTATTCGTGATGTTTTACTCTTCCCAACAATGCGCAATCACTAA Protein sequence : MSNETNQQEELNDQLKVRREKMEQLREKNIDPFGERFERTHLSSELHEAYDRFTKEELVEQKETATVAGRIMTKRGKGKV GFAHLQDRKGQIQIYVRKDAVGDDAYDIFKNADLGDFIGVTGEVMKTDTGEVTIKPTSLVQLSKALRPLPDKYHGLTNVE QRYRQRYLDLISNKESFDRFTKRSEIIREVRNYLNEQDYLEVETPTLHNLAGGAAARPFITHHNALDMELYLRIALELHL KRLIVGGMEKVYEIGRVFRNEGVDTTHNPEFTMLEVYTAYTDYKDVMDLTEGLIKTVANRVLGTGEITYGEVTVDLDTKW KRQHMLDAIKEYSGVDFWPVMSDEEARALAKENNVTITEHMQYGHVVNEFFETFVEEKLIQPTFIYGHPVEISPLAKKNP QDGRFTDRFEVFIVGNEYGNAFTELNDPIDQRERFEAQMRERAGGNDEAHQLDEDFLEALEYGMPPTGGLGIGIDRLVML LTDASAIRDVLLFPTMRNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-113 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006991285.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-113 | 47 |
