Gene Information

Name : lolD (BN424_3493)
Accession : YP_006994229.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Resistance
Product : ABC transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 3476175 - 3476843 bp
Length : 669 bp
Strand : -
Note : [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :

ATGAATTTATTAGAACTTAAACAAGTAACCAAAAAATTTGGGAAAGGTCATACTGAAGTCACGGCCTTAAAGAAAACCGA
TTTTGCTATTAAAGCTGGAGAATTCGTTGCGATTATTGGACCTAGTGGATCTGGCAAAAGCACATTATTAACGATTGCTG
GCGGACTACAAAGCCCGACAGAAGGCGAAGTTTTTATTAACGGGAAAAATTTTAGTAAAGTCAAAGAAAAACAACGTTCA
GCATTACGTTTTAAAGAGCTAGGCTTTATTTTACAAGCGTCAAACCTAATCCCTTTTTTAAGTGTTAATGATCAACTAAA
GCTTGTCAATAAAGTGGAAAAAAAGGCATTTGATCAAAAAGCAACAGATAAGTTATTAGAAGATTTAGGTGTGCTAAATT
TGAAGAATAGTTATCCAAAAGATTTGTCAGGTGGAGAGCGTCAAAGAGTTGCAATTGCTCGTGCCTTGTATCATCATCCA
AGCGTTATTTTAGCAGATGAGCCAACAGCGAGTCTTGATTCAGAAAAAGCTTTTGAAGTTGTTGAGATTTTAGCGAAAGA
AACCAAAGAAAAACAAAAAGCTACGATTATGGTCACCCATGATCAACGTTTGATTGAGCGTTGCGATAAAGTCTACGAAA
TGCGAGATGGCATTTTGAAATTGTTATGA

Protein sequence :

MNLLELKQVTKKFGKGHTEVTALKKTDFAIKAGEFVAIIGPSGSGKSTLLTIAGGLQSPTEGEVFINGKNFSKVKEKQRS
ALRFKELGFILQASNLIPFLSVNDQLKLVNKVEKKAFDQKATDKLLEDLGVLNLKNSYPKDLSGGERQRVAIARALYHHP
SVILADEPTASLDSEKAFEVVEILAKETKEKQKATIMVTHDQRLIERCDKVYEMRDGILKLL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	9e-54	52
SARLGA251_00480	YP_005754062.1	ABC-type transport system ATPase	Not tested	Type-XI SCCmec	Protein	9e-46	50

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
lolD	YP_006994229.2	ABC transporter family protein	CP001581.1.gene798.p	Protein	2e-40	43