Gene Information

Name : cbH (BN424_2909)
Accession : YP_006993645.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Virulence
Product : linear amide C-N hydrolases, choloylglycine hydrolase family protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.1.24
Position : 2903498 - 2904472 bp
Length : 975 bp
Strand : -
Note : [M] COG3049 Penicillin V acylase and related amidases

DNA sequence :
ATGTGTACAGCAGTTACCTATGTAACAAATGATCATTATTTTGGCCGGAATTTAGATTTAGATTTTTCTTATAACGAAAC
GGTGACAATTACCCCAAGAAACTTCGTGTTTCCTTACCGCCATGTATCTGATATATCCCAGCACTATGCCATAATTGGGA
TGGCAACGGTAGTGAATAACTACCCTTTATATTATGATGCAACCAATGAAAAAGGGTTGAGTATGGCTGGTTTGAATTTT
CCTGAAAATGCTGTCTATTTCCCAGAAGCTACAGGAAAAGATAACATTGCTCCGTTTGAATTTATTCCTTGGTTGTTAGG
GCAATGTGGGACTATAAAAGAAGTTAGAGAACTCTTAGAAAAAATAAACTTAGTCAATACTAATTTTAGTGACGAACTTC
CATTATCGCCGCTTCACTGGATGATTACAGATCAGCAGGAGTCAATTGTAGTGGAACAAACAAAAAATGGCTTAGCGATT
TATGAAAATCCTGTTGGAGTCATGACAAACAATCCAACGTTTGATTATCAACTTTTCAACTTAAATAATTATCGACATGT
ATCACCAATCACACCAAATAATTTGTTTTCCAAGGAAATTGATTTAGATATTTACAGTCGAGGGATGGGGGGAATTGGTT
TACCTGGAGATCTTTCATCTGCCTCACGTTTTGTTAAAGTTGCTTTTACAAAATTAAATTCAGTTTCAGGGACATCCGAA
TCAGAAAGTATTAGCCAGTTTTTCCAAATATTAGGTTCAGTTACTCAACAAAGAGGCTTATGCGAAGTTGGTGATGGCAA
GTATGAATATACGATTTATTCATCTTGTTGCAATATGGATAAAGGAATTTACTATTATACAACTTATGAAAACAGTCAAA
TTACTGGGGTTGATATGCACAAAGAGAATTTAGATGGTACTAAACTCGTCAACTATTCATTAGTTTCTGGTCAGCAAATT
AATTTTGTGAATTAG

Protein sequence :
MCTAVTYVTNDHYFGRNLDLDFSYNETVTITPRNFVFPYRHVSDISQHYAIIGMATVVNNYPLYYDATNEKGLSMAGLNF
PENAVYFPEATGKDNIAPFEFIPWLLGQCGTIKEVRELLEKINLVNTNFSDELPLSPLHWMITDQQESIVVEQTKNGLAI
YENPVGVMTNNPTFDYQLFNLNNYRHVSPITPNNLFSKEIDLDIYSRGMGGIGLPGDLSSASRFVKVAFTKLNSVSGTSE
SESISQFFQILGSVTQQRGLCEVGDGKYEYTIYSSCCNMDKGIYYYTTYENSQITGVDMHKENLDGTKLVNYSLVSGQQI
NFVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 2e-107 69
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 2e-107 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbH YP_006993645.2 linear amide C-N hydrolases, choloylglycine hydrolase family protein VFG2162 Protein 5e-112 73