Gene Information

Name : ssb (BN424_2634)
Accession : YP_006993388.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Unknown
Product : single-strand binding family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2622284 - 2622760 bp
Length : 477 bp
Strand : -
Note : [L] COG0629 Single-stranded DNA-binding protein

DNA sequence :
ATGATAAATAGAGCAATATTAACAGGGAGACTGACTACTGATGCAGATTTAAAATATACATCTAGCGGAACAGCAGTATC
TTCTTTCACGTTAGCAGTAAATAGACAGTTCACGAACCAAAGCGGAGAACGAGAAGCAGATTTTATCAACTGCGTAGTAT
GGAGAAAACAAGCAGAGTCGTTAGCTAACTTCACTCGAAAAGGTTCGTTAATTGGAGTAGAAGGCAGATTGCAGACAAGA
AGCTATGACAATCAACAAGGTCAGCGTGTTTATGTAACAGAAGTAGTCGTTGACAGCTTTTCTTTACTAGAGTCGAAGGC
AGCAAACGAGGAACGTCAGCAACCGCAACAAACGAACAGACCGGCAAACAACCAAGCTAACAAACAGCAGTATCAGCAAG
ATAACTTACCAGGTACTGATCCATTTGCTTCAAGCGGACAACCAATCGACATTTCAGATGATGATATGCCTTTCTAA

Protein sequence :
MINRAILTGRLTTDADLKYTSSGTAVSSFTLAVNRQFTNQSGEREADFINCVVWRKQAESLANFTRKGSLIGVEGRLQTR
SYDNQQGQRVYVTEVVVDSFSLLESKAANEERQQPQQTNRPANNQANKQQYQQDNLPGTDPFASSGQPIDISDDDMPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 3e-35 64
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 4e-40 57
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 2e-40 57
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 4e-33 52
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 8e-34 52
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 6e-34 52
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 3e-34 52
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 9e-27 52
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 7e-27 52
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-33 51
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-33 51