Gene Information

Name : clpE (BN424_2424)
Accession : YP_006993179.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit ClpE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2432569 - 2434815 bp
Length : 2247 bp
Strand : +
Note : [O] COG0542 ATPases with chaperone activity,ATP-binding subunit

DNA sequence :
ATGTTATGTCAAAACTGTAATCAACACGATGCCACAATTCATTTATATACAAGTATGAACGGCCAAAGAGGCCAGATAGA
TTTATGTCAAAATTGCTATCAAGAATTAAAAGCAGCTAAAGAACGAGGTGACTTAAAAATGAATCGCTCAAATAATACTC
CTGATCCTTTTGGTCTAGGTGGCTTAGACGAATTATTTAAAGCTTTCCAAGCTGGCCAATCGCCACAAGGTCAACCTAAT
CCACAAATGATTCCTCCAACTCAATCAGGCGGAGGCGGAAAACGCCCTAATGGTCGTCAAGGTGGATTATTAGCCGAATA
CGGTACAAATTTAACGGATATGGCAAAAAACGGAGCTATTGATCCAGTTATTGGACGAGATAATGAAATTAAACGTGTGA
TTGAAATCTTAAATCGCCGTACTAAAAATAATCCTGTTTTAATCGGAGAACCCGGTGTTGGTAAAACAGCTGTGGTTGAA
GGTCTTGCTCAAAAAATCATTGAAGGCGATGTTCCTCAAAAACTGATGGATAAAGAGGTTATACGTTTAGATGTGGCTAG
TTTAGTCCAAGGAACAGGAATTCGTGGTCAATTTGAAGAACGGATGCAACAGCTGATGGATGAATTAAAGAAAAATCCAC
AAATTATTTTATTTATTGACGAAGTTCATGAAATTGTTGGCGCTGGTAGCGCTGAAGGTAGTATGGATGCAGGCAATATG
TTAAAACCAGCATTAGCTCGAGGTGAACTTCAAATGGTAGGAGCAACAACTCTAAAAGAGTACCGGACCATTGAAAAAGA
TGCAGCACTAGAAAGACGTATGCAACCTGTTCGAGTGGATGAACCAACCGCCGAAGAAACGATTACGATTCTAAAAGGAA
TTCAAAAGAAATATGAAGATTACCATCAAGTTGGGTATACAGATGCAGCGATTGAAAGTGCAGTAACATTATCAAGTCGT
TACATTCAAGATCGTTTCTTGCCTGATAAAGCCATCGATTTACTTGATGAAGCTGGTTCTAAGAAAAATTTGACTATTCA
AACAGTCGATCCAAAAATCATTGAAGACAAAATTGCTGATGCAGCATCTCAAAAACAAGCTGCCTTACAACAAGAAGACT
ATGAAAAAGCCGCTTATTATCGTGATCAAGCTGCTAAATTAGCTGCAATGCGTGATCAACAACAACCGGATACTGAAAAA
CCGATTGTTACTGAAAAAGATATGGAACAAATTATCGAAATGAAAACAAATATTCCAGTCGGGGATATTAAAGAAAAAGA
GCAAGCTCAGTTGCGCAATTTAGCTGAAGATTTACAACAACATGTTATTGGTCAAAACGAAGCGGTGGAAAAAGTTTCCA
AAGCCATTCGTCGTAGCCGAATCGGTCTCAATAAGAAAAATCGCCCAATTGGATCTTTCCTATTTGTAGGACCTACCGGA
GTTGGGAAAACTGAATTGGCTAAGCAATTAGCTGTTGAACTATTTGGGACTGCTGATTCCATCATTCGTTTTGATATGAG
TGAGTATATGGAAAAACACAGTGTCGCTAAACTTATCGGTTCACCACCAGGTTATGTAGGCTATGATGAAGCTGGTCAGT
TAACAGAAAAAGTGCGCCGCAATCCATATAGTATCGTTTTACTAGATGAAATTGAAAAAGCGCATCCTGATGTCATGCAC
ATGTTCCTTCAAATTTTAGACGATGGACGTTTAACAGATGCACAAGGAAGAACAGTCAGCTTTAAAGACACCATCATTAT
TATGACTAGTAATGCTGGAACAGGTAACGTTGAAGCCAGTGTTGGATTTGGTGCAACCAATAATGCCACACAAAATTCTG
TTTTAGATCAACTTACTAACTACTTTAAACCAGAATTCATCAATCGCTTTGATGCAATCGTTGAATTTAATCAACTAGAC
AAAACACATTTGATTAAAATTGTCGATTTGTTACTACTTGATGTTAATCATATGCTTGTGGATCAAGGAATTTCAATTGT
CGTTGATGAAGCAGCCAAAGAAAAACTAGTCGAATTGGGCTATGATCCTAAGATGGGGGCACGTCCATTACGTCGTGTGA
TTCAAGAACAAATTGAAGATAAGATTGCTGATTTCTATCTTGATCATCCTGAGATTAAAGAATTAGCTGCAACAACAGAT
GCAAATGGTGATTTAATCGTAACTGAGAAAAGCAACGAACCTGTTGTTTCTGAAGAAGTTGTTCTAACTAAAAAAGAAGA
CGAATAA

Protein sequence :
MLCQNCNQHDATIHLYTSMNGQRGQIDLCQNCYQELKAAKERGDLKMNRSNNTPDPFGLGGLDELFKAFQAGQSPQGQPN
PQMIPPTQSGGGGKRPNGRQGGLLAEYGTNLTDMAKNGAIDPVIGRDNEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVE
GLAQKIIEGDVPQKLMDKEVIRLDVASLVQGTGIRGQFEERMQQLMDELKKNPQIILFIDEVHEIVGAGSAEGSMDAGNM
LKPALARGELQMVGATTLKEYRTIEKDAALERRMQPVRVDEPTAEETITILKGIQKKYEDYHQVGYTDAAIESAVTLSSR
YIQDRFLPDKAIDLLDEAGSKKNLTIQTVDPKIIEDKIADAASQKQAALQQEDYEKAAYYRDQAAKLAAMRDQQQPDTEK
PIVTEKDMEQIIEMKTNIPVGDIKEKEQAQLRNLAEDLQQHVIGQNEAVEKVSKAIRRSRIGLNKKNRPIGSFLFVGPTG
VGKTELAKQLAVELFGTADSIIRFDMSEYMEKHSVAKLIGSPPGYVGYDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVMH
MFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGNVEASVGFGATNNATQNSVLDQLTNYFKPEFINRFDAIVEFNQLD
KTHLIKIVDLLLLDVNHMLVDQGISIVVDEAAKEKLVELGYDPKMGARPLRRVIQEQIEDKIADFYLDHPEIKELAATTD
ANGDLIVTEKSNEPVVSEEVVLTKKEDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-152 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_006993179.2 ATP-dependent Clp protease ATP-binding subunit ClpE VFG0080 Protein 0.0 61
clpE YP_006993179.2 ATP-dependent Clp protease ATP-binding subunit ClpE VFG0079 Protein 4e-157 53