|
Name : tnpR (BN424_2366) Accession : YP_006993121.2 Strain : Carnobacterium maltaromaticum LMA28 Genome accession: NC_019425 Putative virulence/resistance : Unknown Product : resolvase, N terminal domain protein Function : - COG functional category : - COG ID : - EC number : - Position : 2371916 - 2372470 bp Length : 555 bp Strand : - Note : [L] COG1961 Site-specific recombinases, DNA invertase Pin homologs DNA sequence : ATGATTTTTGGCTATGCTCGAGTGAGTACAGAGGATCAAAATTTAAATTTGCAAATCGATGCACTCACCCAACACGGTAT CGATAAACTATTCCAAGAAAAGGTGACAGGTTCAAAACGAGATCGTCCACAATTGGAAGACATGATAAGAGGGTTACGTG ATGGTGACTCAGTGGTCATTTATAAACTCGATCGTATTTCACGTTCAACTAAACATTTGATAGAGCTTTCAGAAACCTTT GAAGAGCTTGGAGTTAATTTTATCTCTATTCAAGATAATGTGGATACATCTACTTCTATGGGAAGGTTCTTTTTCCGAGT CATGGCTAGTTTAGCAGAGTTGGAACGTGACATTACGATTGAAAGAACCAAATCAGGTCTTGAAGCAGCAAGAGCGCGTG GAAAAAAAGGAGGACGACCAAGTAAAGCCAGTCAATCAATTGAGTTGGCTTTGAAAATGTACGATAGTAAGCAATATTCA ATCAAACAGATTCTTGAAGCCTCTAAATTAAGTAAAACAACTCTATACCGCTATCTTAATGGAAGGAAAAACTAA Protein sequence : MIFGYARVSTEDQNLNLQIDALTQHGIDKLFQEKVTGSKRDRPQLEDMIRGLRDGDSVVIYKLDRISRSTKHLIELSETF EELGVNFISIQDNVDTSTSMGRFFFRVMASLAELERDITIERTKSGLEAARARGKKGGRPSKASQSIELALKMYDSKQYS IKQILEASKLSKTTLYRYLNGRKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| binR | YP_254224.1 | resolvase/integrase BinR | Not tested | ¥ðSh1 | Protein | 4e-32 | 46 |
| SH1761 | YP_253676.1 | DNA-invertase | Not tested | ¥ÕSh1 | Protein | 3e-32 | 46 |
| binL | YP_254524.1 | DNA-invertase | Not tested | ¥ðSh2 | Protein | 3e-32 | 46 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 46 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 46 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 8e-30 | 46 |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 46 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 46 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 46 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 46 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 46 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 8e-30 | 46 |
| CDBH8_0918 | YP_005160010.1 | transposase-like protein | Not tested | Not named | Protein | 3e-31 | 43 |
| 1_365 | CAJ77091.1 | Resolvase N-term | Not tested | AbaR1 | Protein | 2e-22 | 42 |
| resX | ADZ05753.1 | invertase/resolvase | Not tested | AbaR10 | Protein | 2e-22 | 42 |
| resX | ADZ05809.1 | invertase/resolvase | Not tested | AbaR20 | Protein | 2e-22 | 42 |
| ACICU_00231 | YP_001844890.1 | site-specific recombinase, DNA invertase Pin protein | Not tested | AbaR20 | Protein | 2e-22 | 42 |
| resX | AGK36651.1 | partial invertase/resolvase | Not tested | AbaR26 | Protein | 2e-22 | 42 |
| resX | ACN81037.1 | partial invertase/resolvase | Not tested | AbaR5 | Protein | 2e-22 | 42 |
