Gene Information

Name : tnpR (BN424_2366)
Accession : YP_006993121.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Unknown
Product : resolvase, N terminal domain protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2371916 - 2372470 bp
Length : 555 bp
Strand : -
Note : [L] COG1961 Site-specific recombinases, DNA invertase Pin homologs

DNA sequence :
ATGATTTTTGGCTATGCTCGAGTGAGTACAGAGGATCAAAATTTAAATTTGCAAATCGATGCACTCACCCAACACGGTAT
CGATAAACTATTCCAAGAAAAGGTGACAGGTTCAAAACGAGATCGTCCACAATTGGAAGACATGATAAGAGGGTTACGTG
ATGGTGACTCAGTGGTCATTTATAAACTCGATCGTATTTCACGTTCAACTAAACATTTGATAGAGCTTTCAGAAACCTTT
GAAGAGCTTGGAGTTAATTTTATCTCTATTCAAGATAATGTGGATACATCTACTTCTATGGGAAGGTTCTTTTTCCGAGT
CATGGCTAGTTTAGCAGAGTTGGAACGTGACATTACGATTGAAAGAACCAAATCAGGTCTTGAAGCAGCAAGAGCGCGTG
GAAAAAAAGGAGGACGACCAAGTAAAGCCAGTCAATCAATTGAGTTGGCTTTGAAAATGTACGATAGTAAGCAATATTCA
ATCAAACAGATTCTTGAAGCCTCTAAATTAAGTAAAACAACTCTATACCGCTATCTTAATGGAAGGAAAAACTAA

Protein sequence :
MIFGYARVSTEDQNLNLQIDALTQHGIDKLFQEKVTGSKRDRPQLEDMIRGLRDGDSVVIYKLDRISRSTKHLIELSETF
EELGVNFISIQDNVDTSTSMGRFFFRVMASLAELERDITIERTKSGLEAARARGKKGGRPSKASQSIELALKMYDSKQYS
IKQILEASKLSKTTLYRYLNGRKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 4e-32 46
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 3e-32 46
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 3e-32 46
res AGF35025.1 resolvase Not tested SGI1 Protein 8e-30 46
res AGF35059.1 resolvase Not tested SGI1 Protein 8e-30 46
res AGK06929.1 resolvase Not tested SGI1 Protein 8e-30 46
res AGK06966.1 resolvase Not tested SGI1 Protein 8e-30 46
res AGK07012.1 resolvase Not tested SGI1 Protein 8e-30 46
res AGK07070.1 resolvase Not tested SGI1 Protein 8e-30 46
res AAK02044.1 resolvase Not tested SGI1 Protein 8e-30 46
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 8e-30 46
res AGF34985.1 resolvase Not tested SGI1 Protein 8e-30 46
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 3e-31 43
1_365 CAJ77091.1 Resolvase N-term Not tested AbaR1 Protein 2e-22 42
resX ADZ05753.1 invertase/resolvase Not tested AbaR10 Protein 2e-22 42
resX ADZ05809.1 invertase/resolvase Not tested AbaR20 Protein 2e-22 42
ACICU_00231 YP_001844890.1 site-specific recombinase, DNA invertase Pin protein Not tested AbaR20 Protein 2e-22 42
resX AGK36651.1 partial invertase/resolvase Not tested AbaR26 Protein 2e-22 42
resX ACN81037.1 partial invertase/resolvase Not tested AbaR5 Protein 2e-22 42