Gene Information

Name : tcsA (BN424_2109)
Accession : YP_006992973.1
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Unknown
Product : basic membrane family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2134709 - 2135761 bp
Length : 1053 bp
Strand : -
Note : [R] COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

DNA sequence :
TTGAAAAAACGTAATCTTATGGGTCTACTTGCACTAGGTGTTGGTGTTAGTATGACATTAGCTGCTTGTGGTGGCAACAG
TGGAGACAAAGGCAAAGATGGTGGAGATGATAAAAAAACAACTCACACAGCAGCAATGGTAACAGATGTTGGTGGAGTGG
ATGATAAATCCTTCAACCAATCAGCTTGGGAAGGTTTACAAGCGTGGGGTAAAGAACATGGCCTTAAAAAGGGGAAAGAT
GGCTTTAACTATTTGCAATCAAACTCTGACTCAGATTTCGTAACAAATTTAAACAGTGCCGTTAAAGGTAATTTTAATAC
CGTATTTGGAATTGGATATAAAATTGCACCAGCATTAGAAGATGTAGCTAAACAAAATCCTAAAACAAACTTTGCAATCA
TTGATTCAGTTGTTGAAGGAGATAACGTAGTTTCAATCGTCTTTAAAGATAATGAAGCTGCATTTTTAGCAGGAGTTGCT
GCTGCTAAAACAACTGAAACGAAAAAATTAGGTTTCATTGGTGGACAAGAAGGCGAAGTAATTGGCCGTTTTGAAGCTGG
ATTTATTGCAGGCGTAAAAGCTGTTGATCCTGATATCGATGTAAAAGTTGAATATGCTGGTTCATTTGGTGATCCTGCAA
AAGGGAAACAACTAGCAGCTGCAATGTATAACAGTGGCATTGATATTATCTATCAAGCAGCTGGCGATACTGGTAATGGT
GTCTTCTCAGAAGCTAAAGATATCATGAAAGCTGATGAGTCTAAAAAAGTTTGGGTTATCGGTGTTGACCGTGATCAAGA
TGCTGAAGGTGAATATGACGGAGGAAACTTAACATTAACTTCAACCCTTAAAGGTGTAGCTGCAACGGTTATTGATATTT
CAAACCGTGCAATGGACGATAAATTCCCTGGTGGCGAAACATTGACTTATGGATTGAAAGAAGATGGCGTTGGTATCACT
GAAGGAAATCTTTCTAAAGAAGTTCTGAAAGATGTCGATGACTATAAAGCACAAATTATTGATGGAAAAGTTGAAGTTCC
AGAAAAGCCTTAA

Protein sequence :
MKKRNLMGLLALGVGVSMTLAACGGNSGDKGKDGGDDKKTTHTAAMVTDVGGVDDKSFNQSAWEGLQAWGKEHGLKKGKD
GFNYLQSNSDSDFVTNLNSAVKGNFNTVFGIGYKIAPALEDVAKQNPKTNFAIIDSVVEGDNVVSIVFKDNEAAFLAGVA
AAKTTETKKLGFIGGQEGEVIGRFEAGFIAGVKAVDPDIDVKVEYAGSFGDPAKGKQLAAAMYNSGIDIIYQAAGDTGNG
VFSEAKDIMKADESKKVWVIGVDRDQDAEGEYDGGNLTLTSTLKGVAATVIDISNRAMDDKFPGGETLTYGLKEDGVGIT
EGNLSKEVLKDVDDYKAQIIDGKVEVPEKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0137 YP_281501.1 nucleoside-binding protein Not tested Not named Protein 3e-76 51