Gene Information

Name : hrtA (BN424_2031)
Accession : YP_006992787.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Resistance
Product : ABC transporter family protein
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.-
Position : 2049882 - 2050556 bp
Length : 675 bp
Strand : +
Note : [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGACAGCTAAACTTATTTTAGAAGATGTATCAAAATATTATCAAGACGGCTCTGAACAAATCGAAGTCCTTAAAAATCT
TTCCTTAAGCGTGGCAGAAGGAGAATTCGTTGCGATAGTTGGACCAAGTGGTGCTGGTAAAAGTACATTCCTATCAATTG
CTGGCGCCTTACTTTCCCCTTCTTCTGGAAATATCCAGATTGGAGGAACGAGCCTAAACTCTTTATCTCAAAAAAAATGG
ACACAATTGCGCTTAGAAAAAATTGGCTTTATTTTCCAGAGTGGCAATTTAATTCCTTATTTAAATGTCCTAGATCAACT
CTTATTGATTCCAGAACTAAATGGTACAAAAAAACAGAATCGCCAAAAAGCATTGGACTTATTGGAAGATTTGGGATTGT
CTCATCGCTTAACTCAATATCCTGAAAAATTATCAGGTGGGGAGCGACAACGAGTTGCGATTGCTCGAGCATTAATGAAT
GAACCTGATATTATTTTAGCAGACGAACCAACAGCGAGCCTTGATTCTGAGCGCGGCTATCAAGTTGTAAAAATGATTGC
TGCTGAAGTCCATAAAAAGAATAAAGCTGCTGTCATGGTTACTCATGATGAACGTGTCTTAGATCTAGTTGACCGTGTCT
TACGAATTGAAGATGGTCGGTTATATACAGTTTAA

Protein sequence :
MTAKLILEDVSKYYQDGSEQIEVLKNLSLSVAEGEFVAIVGPSGAGKSTFLSIAGALLSPSSGNIQIGGTSLNSLSQKKW
TQLRLEKIGFIFQSGNLIPYLNVLDQLLLIPELNGTKKQNRQKALDLLEDLGLSHRLTQYPEKLSGGERQRVAIARALMN
EPDIILADEPTASLDSERGYQVVKMIAAEVHKKNKAAVMVTHDERVLDLVDRVLRIEDGRLYTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-43 46
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 1e-40 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-36 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hrtA YP_006992787.2 ABC transporter family protein CP001581.1.gene798.p Protein 5e-35 42
hrtA YP_006992787.2 ABC transporter family protein NC_012469.1.7686946. Protein 6e-20 41