Gene Information

Name : yrkD (BN424_1970)
Accession : YP_006992726.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Unknown
Product : uncharacterised BCR, COG1937 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1997621 - 1997830 bp
Length : 210 bp
Strand : -
Note : [S] COG1937 Uncharacterized protein conserved in bacteria

DNA sequence :
ATGCGTGGCATTTTAAAAATGATGGAAGATGGAAAAGAGTGTAAAGAAATCATTGTACAATTATCAGCTGTTCGTTCCAG
TATCGATAAAGTCATGGGATTAATGGTTGCTGAAAATTTGATTCAATCAATTGAGTATGAAAATGGCACAAATCCCGAAA
AGGATGAAGCTGTGAGAGAAGCAGTAGAGTTAATTGTGAAAACAATGTAA

Protein sequence :
MRGILKMMEDGKECKEIIVQLSAVRSSIDKVMGLMVAENLIQSIEYENGTNPEKDEAVREAVELIVKTM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC57484.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 3e-12 45
unnamed BAA82210.2 - Not tested Type-II SCCmec Protein 3e-12 45
SAV0048 NP_370572.1 hypothetical protein Not tested Type-II SCCmec Protein 4e-12 45
SA0045 NP_373285.1 hypothetical protein Not tested Type-II SCCmec Protein 4e-12 45
SERP2514 YP_190056.1 hypothetical protein Not tested Type-II SCCmec Protein 4e-12 45
unnamed BAB47614.1 hypothetical protein Not tested Type-III SCCmec Protein 3e-12 45
SAR0047 YP_039520.1 hypothetical protein Not tested Type-II SCCmec Protein 4e-12 45
unnamed BAA82170.2 - Not tested Type-II SCCmec Protein 6e-12 43
unnamed BAA86632.1 hypothetical protein Not tested Type-I SCCmec Protein 6e-12 43
unnamed BAB83476.1 - Not tested SCC 12263 Protein 6e-12 42