Gene Information

Name : xerD (BN424_1523)
Accession : YP_006992279.2
Strain : Carnobacterium maltaromaticum LMA28
Genome accession: NC_019425
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1561613 - 1562503 bp
Length : 891 bp
Strand : +
Note : [L] COG4974 Site-specific recombinase XerD

DNA sequence :
ATGGAAGATGATTTAAAAGAGTATCTTCATTTTTTAACCATCGAGCGTGGTCTTTCAAAAAATACAATTGAAAGTTATCG
CCGAGACTTAGTTCATTACTTAGATTATTTAAACGAGCATCAAATAGCTAGTTGGAATGAATTAGATCGTTATTTTGTGC
TGAGTTTTTTGCAACAGCTTAAAGATGAAGAGAAAGCTGCAGGTACGATTATTCGGATGGTTTCTAGTTTGCGAAAATTC
CATCAATTTTTAAAACAAGAGCGCTTAAGTGAAATCGACCCAATGTTACACATTGATACTCCTAAAAAAGCGCAAACACT
CCCTAAAATTTTATCAATGAAGGAAGTTGAAAAGTTAATTGAAACTCCAGACACAAATACTACCTTAGGACTGAGAGATC
GGGCCATGCTAGAAGTGATGTATGCGACGGGGTTGCGTGTAACTGAATTAACGGAATTAAGGTTAACCGATTTGCATTTA
TCTTTAGGATTGATTCAAACAATTGGAAAAGGAGATAAGGAGCGAATTATTCCGTTAGGTGATTTAGCCATTGAATGGAT
TGAAAAATATTTACGTTATAGTCGGGTAAAATTAGAAAAATCAGGTAAGCGAACGCCTTATTTGTTTTTAAATCATCATG
GTGGCGGTTTAACTAGACAAGGTGTTTGGAAAAATTTGAAAAAATTAGTTCTCTTAGCAGGAATTGAAAAAGAGGTCACA
CCACATACTTTAAGGCATTCATTTGCAACTCATTTATTAGAAAATGGAGCTGATTTGCGAGTGGTACAAGAGCTTTTGGG
GCATGTTGATATTTCGACGACTCAAATTTACACACATATCACTAAAAAACGGATGACAGAAGTGTATAAAACCTATCATC
CGCGTGCTTAA

Protein sequence :
MEDDLKEYLHFLTIERGLSKNTIESYRRDLVHYLDYLNEHQIASWNELDRYFVLSFLQQLKDEEKAAGTIIRMVSSLRKF
HQFLKQERLSEIDPMLHIDTPKKAQTLPKILSMKEVEKLIETPDTNTTLGLRDRAMLEVMYATGLRVTELTELRLTDLHL
SLGLIQTIGKGDKERIIPLGDLAIEWIEKYLRYSRVKLEKSGKRTPYLFLNHHGGGLTRQGVWKNLKKLVLLAGIEKEVT
PHTLRHSFATHLLENGADLRVVQELLGHVDISTTQIYTHITKKRMTEVYKTYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-54 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-54 44